Biblio

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2013
Maly MR, Lahijanian M, Kavraki LE, Kress-Gazit H, Vardi MY.  2013.  Iterative Temporal Motion Planning for Hybrid Systems in Partially Unknown Environments. ACM International Conference on Hybrid Systems: Computation and Control.
Abstract      Preprint PDF
Luna R, Şucan IA, Moll M, Kavraki LE.  2013.  Anytime Solution Optimization for Sampling-Based Motion Planning. IEEE International Conference on Robotics and Automation.
Abstract      Preprint PDF
Grady DK, Moll M, Kavraki L.  2013.  Automated Model Approximation for Robotic Navigation with POMDPs. IEEE International Conference on Robotics and Automation.
Abstract      Preprint PDF
Gipson B, Moll M, Kavraki LE.  2013.  Resolution Independent Density Estimation for Motion Planning in High-Dimensional Spaces. IEEE International Conference on Robotics and Automation.
Abstract      Preprint PDF
2012
Maly MR, Kavraki LE.  2012.  Low-Dimensional Projections for SyCLoP. IEEE/RSJ International Conference on Intelligent Robots and Systems. :420-425.
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Sucan IA, Kavraki LE.  2012.  Accounting for Uncertainty in Simultaneous Task and Motion Planning Using Task Motion Multigraphs. IEEE International Conference on Robotics and Automation. :4822-4828.
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Şucan IA, Moll M, Kavraki LE.  2012.  The Open Motion Planning Library. IEEE Robotics & Automation Magazine. 19(4):72-82.
Abstract      Preprint PDF     Publisher's web site     
Shehu A, Kavraki LE.  2012.  Modeling Structures and Motions of Loops in Protein Molecules. Entropy. 14(2):252-290.
Abstract      Preprint PDF     Publisher's web site     
Gipson B, Hsu D, Kavraki LE, Latombe J-C.  2012.  Computational Models of Proteins Kinematics and Dynamics: Beyond Simulation. Annual Reviews of Analytical Chemistry. 5:273-291.
Abstract      Preprint PDF     Publisher's web site     
Bekris KE, Grady DK, Moll M, Kavraki LE.  2012.  Safe Distributed Motion Coordination for Second-Order Systems With Different Planning Cycles. International Journal of Robotics Research. 31:129-150.
Abstract      Preprint PDF     Publisher's web site     
Dhanik A, McMurray JS, Kavraki LE.  2012.  AUTODOCK-based Incremental Docking Protocol to Improve Docking of Large Ligands. IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW). :48-55.
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Dhanik A, McMurray JS, Kavraki LE.  2012.  Binding Modes of Peptidomimetics Designed to Inhibit STAT3. PLoS ONE. 7(12):e51603.
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Plaku E, Kavraki L, Vardi M.  2012.  Falsification of LTL safety properties in hybrid systems. International Journal on Software Tools for Technology Transfer (STTT).
Preprint PDF     Publisher's web site     
Grady DK, Moll M, Hegde C, Sankaranarayanan AC, Baraniuk RG, Kavraki LE.  2012.  Multi-Objective Sensor-Based Replanning for a Car-Like Robot. IEEE International Symposium on Safety, Security, and Rescue Robotics.
Abstract      Preprint PDF
Grady DK, Moll M, Hegde C, Sankaranarayanan AC, Baraniuk RG, Kavraki LE.  2012.  Multi-Robot Target Verification with Reachability Constraints. IEEE International Symposium on Safety, Security, and Rescue Robotics.
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Dhanik A, Kavraki L.  2012.  Protein-ligand interactions: computational docking. eLS. John Wiley & Sons Ltd.
Abstract      Preprint PDF     Publisher's web site     
Sucan IA, Kavraki LE.  2012.  A Sampling-Based Tree Planner for Systems With Complex Dynamics. IEEE Transactions on Robotics. 28:116-131.
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2011
Bhatia A, Maly MR, Kavraki LE, Vardi MY.  2011.  Motion Planning with Complex Goals. Robotics Automation Magazine, IEEE. 18:55-64.
Abstract      Preprint PDF     Publisher's web site     
Heath AP, Bennett GN, Kavraki LE.  2011.  An Algorithm for Efficient Identification of Branched Metabolic Pathways. Journal of Computational Biology. 18:1575-1597.
Abstract      Preprint PDF     Publisher's web site     
Gipson B, Masiel D, Browning N, Spence J, Mitsuoka K, Stahlberg H.  2011.  Automatic recovery of missing amplitudes and phases in tilt-limited electron crystallography of two-dimensional crystals. Physical Review E. 84(1)
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Grady DK, Moll M, Hegde C, Sankaranarayanan AC, Baraniuk RG, Kavraki LE.  2011.  Look Before You Leap: Predictive Sensing and Opportunistic Navigation. Workshop on Progress and Open Problems in Motion Planning at the IEEE/RSJ Conf. on Intelligent Robots and Systems.
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Moll M, Bryant DH, Kavraki LE.  2011.  The LabelHash Server and Tools for Substructure-Based Functional Annotation. Bioinformatics. 27:2161--2162.
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Dhanik A, McMurray JS, Kavraki LE.  2011.  On modeling peptidomimetics in complex with the SH2 domain of Stat3. 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC ’11). :3329-3332.
Abstract      Preprint PDF     Publisher's web site     
Grady DK, Bekris KE, Kavraki LE.  2011.  Asynchronous Distributed Motion Planning with Safety Guarantees under Second-Order Dynamics. Algorithmic Foundations of Robotics IX. 68:53-70.
Abstract      Preprint PDF     Publisher's web site     
Heath AP, Bennett GN, Kavraki LE.  2011.  Identifying Branched Metabolic Pathways by Merging Linear Metabolic Pathways. 15th Annual International Conference on Research in Computational Molecular Biology (RECOMB). 6577/2011:70-84.
Abstract      Preprint PDF     Publisher's web site     
Sucan IA, Kavraki LE.  2011.  Mobile Manipulation: Encoding Motion Planning Options Using Task Motion Multigraphs. IEEE International Conference on Robotics and Automation. :5492--5498.
Preprint PDF     Publisher's web site     
Sucan IA, Kavraki LE.  2011.  On the Advantages of Using Task Motion Multigraphs for Efficient Mobile Manipulation. IEEE/RSJ International Conference on Intelligent Robots and Systems. :4621-4626.
Preprint PDF     Publisher's web site     
Şucan IA.  2011.  Task and Motion Planning for Mobile Manipulators.
Abstract      Preprint PDF
Moll M, Sucan IA, Bordeaux J, Kavraki LE.  2011.  Teaching Motion Planning Concepts to Undergraduate Students. IEEE Workshop on Advanced Robotics and its Social Impacts.
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Grady DK.  2011.  Unsynchronized Distributed Motion Planning with Safety Guarantees under Second-Order Dynamics.
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2010
Bhatia A, Kavraki LE, Vardi MY.  2010.  Sampling-Based Motion Planning with Temporal Goals. IEEE International Conference on Robotics and Automation. :2689-2696.
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Stamati H, Clementi C, Kavraki LE.  2010.  Application of nonlinear dimensionality reduction to characterize the conformational landscape of small peptides. Proteins. 78:223-235.
Abstract           Publisher's web site     
Moll M, Bryant DH, Kavraki LE.  2010.  The LabelHash Algorithm for Substructure Matching. BMC Bioinformatics. 11(1):555.
Abstract      Preprint PDF     Publisher's web site     
Plaku E, Kavraki LE, Vardi MY.  2010.  Motion Planning with Dynamics by a Synergistic Combination of Layers of Planning. IEEE Transactions on Robotics. 26:469-482.
Abstract      Preprint PDF     Publisher's web site     
Bryant DH, Moll M, Chen BY, Fofanov VY, Kavraki LE.  2010.  Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction. BMC Bioinformatics. 11:242.
Abstract      Preprint PDF     Publisher's web site     
Sucan IA, Kalakrishnan M, Chitta S.  2010.  Combining Planning Techniques for Manipulation Using Realtime Perception. IEEE International Conference on Robotics and Automation. :2895-2901.
Preprint PDF     Publisher's web site     
Dhanik A.  2010.  Computational Modeling of Structural Heterogeneity in Folded Proteins. PhD Thesis
Heath AP, Bennett GN, Kavraki LE.  2010.  Finding Metabolic Pathways Using Atom Tracking. Bioinformatics. 26:1548-1555.
Abstract      Preprint PDF     Publisher's web site     
Bhatia A, Kavraki LE, Vardi MY.  2010.  Motion Planning with Hybrid Dynamics and Temporal Goals. IEEE Conference on Decision and Control. :1108-1115.
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Sucan IA, Kavraki LE.  2010.  On the Implementation of Single-Query Sampling-Based Motion Planners. IEEE International Conference on Robotics and Automation. :2005-2011.
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Moll M, Bordeaux J, Kavraki LE.  2010.  Teaching Robot Motion Planning. Computers in Education (Special Issue on Novel Approaches to Robotics Education). 20:50–59.
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Ciocarlie M, Hsiao K, Jones GE, Chitta S, Rusu RB, Sucan IA.  2010.  Towards Reliable Grasping and Manipulation in Household Environments. International Symposium on Experimental Robotics.
Haspel N, Moll M, Baker ML, Chiu W, Kavraki LE.  2010.  Tracing conformational changes in proteins. BMC Structural Biology. 10:S1.
Abstract      Preprint PDF     Publisher's web site     
Schenk AD, Casta D, Gipson B, Arheit M, Zeng X, Stahlberg H.  2010.  3D Reconstruction from 2D Crystal Image and Diffraction Data. Cryo-EM, Part B: 3-D Reconstruction. 482:101-129.
     Publisher's web site     
2009
Sucan IA, Kavraki LE.  2009.  On the Performance of Random Linear Projections for Sampling-Based Motion Planning. IEEE/RSJ International Conference on Intelligent Robots and Systems. :2434-2439.
Preprint PDF     Publisher's web site     
Rusu RB, Sucan IA, Gerkey BP, Chitta S, Beetz M, Kavraki LE.  2009.  Real-Time Perception-Guided Motion Planning for a Personal Robot. IEEE/RSJ International Conference on Intelligent Robots and Systems. :4245-4252.
Preprint PDF     Publisher's web site     
Heath AP, Kavraki LE.  2009.  Computational Challenges in Systems Biology. Computer Science Review. 3:1-17.
Abstract      Preprint PDF     Publisher's web site     
Plaku E, Kavraki LE, Vardi MY.  2009.  Falsification of LTL Safety Properties in Hybrid Systems. Proc. of the Conf. on Tools and Algorithms for the Construction and Analysis of Systems (TACAS 2009).
Abstract      Preprint PDF
Buban JP, Ramasse Q, Gipson B, Browning ND, Stahlberg H.  2009.  High-resolution low-dose scanning transmission electron microscopy. Journal of Electron Microscopy. 10:1–10.
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Plaku E, Kavraki LE, Vardi MY.  2009.  Hybrid systems: from verification to falsification by combining motion planning and discrete search. Formal Methods in System Design. 34:157-182.
Abstract      Preprint PDF     Publisher's web site