Biblio

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Sucan IA, Kavraki LE.  2012.  Accounting for Uncertainty in Simultaneous Task and Motion Planning Using Task Motion Multigraphs. IEEE International Conference on Robotics and Automation. :4822-4828.
Abstract      Preprint PDF
Yao H, Kristensen DM, Mihalek I, Sowa M, Shaw C, Kimmel M, Kavraki LE, Lichtarge O.  2003.  An Accurate, Sensitive, and Scalable Method to Identify Functional Sites in Protein Structures. Journal of Molecular Biology. 326:255-261.
Abstract           Publisher's web site     
Heath AP, Bennett GN, Kavraki LE.  2011.  An Algorithm for Efficient Identification of Branched Metabolic Pathways. Journal of Computational Biology. 18:1575-1597.
Abstract      Preprint PDF     Publisher's web site     
Agrawal PK, Guibas LJ, Edelsbrunner H, Erickson J, Isard M, Har-Peled S, Hershberger J, Jensen C, Kavraki LE, Koehl P et al..  2002.  Algorithmic Issues in Modeling Motion. ACM Computing Surveys. 34:550-572.
Abstract           Publisher's web site     
Chen BY, Fofanov VY, Kristensen DM, Kimmel M, Lichtarge O, Kavraki LE.  2005.  Algorithms for Structural Comparison and Statistical Analysis of 3D Protein Motifs. Pacific Symposium on Biocomputing.
Kavraki LE.  1999.  Algorithms in Robotics: The Motion Planning Perspective. Frontiers of Engineering Publication. :90-93.
Moll M, Goldberg KY, Erdmann MA, Fearing RS.  2002.  Aligning Parts for Micro Assemblies. Assembly Automation. 22:46--54.
Abstract      Preprint PDF     Publisher's web site     
Stamati H.  2007.  Analysis of Molecular Motion using Non-Linear Dimensionality Reduction. Department of Computer Science.
Abstract      Preprint PDF
Kavraki LE, Kolountzakis MN, Latombe J-C.  1998.  Analysis of Probabilistic Roadmaps for Path Planning. IEEE Transactions on Robotics and Automation. 14(1):166-171.
Abstract      Preprint PDF     Publisher's web site     
Kavraki LE, Kolountzakis MN, Latombe J-C.  1996.  Analysis of Probabilistic Roadmaps for Path Planning. Proceeedings of The 1996 International Conference on Robotics and Automation (ICRA 1996). :3020-3026.
Preprint PDF
Bryant DH, Moll M, Chen BY, Fofanov VY, Kavraki LE.  2010.  Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction. BMC Bioinformatics. 11:242.
Abstract      Preprint PDF     Publisher's web site     
Bekris KE, Argyros AA, Kavraki LE.  2004.  Angle-Based Methods for Mobile Robot Navigation: Reaching the Entire Plane. Proceedings of The IEEE International Conference on Robotics and Automation (ICRA). :2373--2378.
Abstract      Preprint PDF     Publisher's web site     
Luna R, Şucan IA, Moll M, Kavraki LE.  2013.  Anytime Solution Optimization for Sampling-Based Motion Planning. IEEE International Conference on Robotics and Automation.
Abstract      Preprint PDF
Stamati H, Clementi C, Kavraki LE.  2010.  Application of nonlinear dimensionality reduction to characterize the conformational landscape of small peptides. Proteins. 78:223-235.
Abstract           Publisher's web site     
Zhang M, Kavraki LE.  2002.  Approximating Solutions of Molecular Inverse Kinematics Problems by Subdivision. The 24th International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS) and the Annual Meeting of the Biomedical Engineering Society (BMES). :2182-2183.
Abstract           Publisher's web site     
Grady DK, Bekris KE, Kavraki LE.  2011.  Asynchronous Distributed Motion Planning with Safety Guarantees under Second-Order Dynamics. Algorithmic Foundations of Robotics IX. 68:53-70.
Abstract      Preprint PDF     Publisher's web site     
Dhanik A, McMurray JS, Kavraki LE.  2012.  AUTODOCK-based Incremental Docking Protocol to Improve Docking of Large Ligands. IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW). :48-55.
Abstract      Preprint PDF
Grady DK, Moll M, Kavraki L.  2013.  Automated Model Approximation for Robotic Navigation with POMDPs. IEEE International Conference on Robotics and Automation.
Abstract      Preprint PDF
Zeng X, Gipson B, Zheng ZY, Renault L, Stahlberg H.  2007.  Automatic lattice determination for two-dimensional crystal images.. Journal of structural biology. 160:353–61.
Abstract           Publisher's web site     
Gipson B, Masiel D, Browning N, Spence J, Mitsuoka K, Stahlberg H.  2011.  Automatic recovery of missing amplitudes and phases in tilt-limited electron crystallography of two-dimensional crystals. Physical Review E. 84(1)
     Publisher's web site