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Finn PW, Kavraki LE.  1999.  Computational Approaches to Drug Design. Algorithmica. 25:347-371.
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LaValle S, Finn PW, Kavraki LE, Latombe J-C.  1999.  Efficient Database Screening for Rational Drug Design Using Pharmacophore-Constrained Conformational Search. The Third ACM International Conference on Computational Biology (RECOMB). :250-259.
Preprint PDF     Publisher's web site     
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Finn PW, Halperin D, Kavraki LE, Latombe J-C, Motwani R, Shelton C, Venkat S.  1996.  Geometric Manipulation of Flexible Ligands. LNCS Series Applied Computational Geometry - Towards Geometric Engineering. 1148:67-78.
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R
LaValle S, Finn PW, Kavraki LE, Latombe J-C.  2000.  A Randomized Kinematics-based Approach to Pharmacophore-Constrained Conformational Search and Database Screening. Journal of Computational Chemistry. 21:731-747.
Abstract      Preprint PDF
Finn PW, Kavraki LE, Latombe J-C, Shelton C, Venkatasubramanian S, Yao A.  1998.  RAPID: Randomized Pharmacophore Identification for drug design. Computational Geometry: Theory and Applications. 10(4):263-272.
Abstract      Preprint PDF     Publisher's web site     
Finn PW, Kavraki LE, Latombe J-C, Motwani R, Shelton C, Venkatasubramanian S, Yao A.  1997.  RAPID: Randomized Pharmacophore Identification for drug design. ACM Conference on Computational Geometry. :324-333.
Abstract      Preprint PDF     Publisher's web site     
S
Finn PW, Kavraki LE, Latombe J-C, Motwani R, Venkatasubramanian S.  1997.  Search Techniques for Rational Drug Design. International Conference on Intelligent Information Systems. :2-6.
Abstract           Publisher's web site