Kavraki Lab | Physical and Biological Computing

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2007

The MASH Pipeline for Protein Function Prediction and an Algorithm for the Geometric Refinement of 3D Motifs, Chen BY, Fofanov VY, Bryant DH, Dodson BD, Kristensen DM, Lisewski AM, Kimmel M, Lichtarge O, Kavraki LE , Journal of Computational Biology, Volume 14, Number 6, p.791-816, (2007)

2006

Geometric Sieving: Automated Distributed Optimization of 3D Motifs for Protein Function Prediction, Chen BY, Fofanov VY, Bryant DH, Dodson BD, Kristensen DM, Lisewski AM, Kimmel M, Lichtarge O, Kavraki LE , Research in Computational Biology: 10th Annual International Conference (RECOMB), April, Venice, Italy, (2006)

Recurrent Use of Evolutionary Importance for Functional Annotation of Proteins Based on Local Structural Similarity, Kristensen DM, Chen BY, Fofanov VY, Ward RM, Lisewski AM, Kimmel M, Kavraki LE, Lichtarge O , Protein Science, Volume 15, Number 6, p.1530-1536, (2006)