Biblio

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2010
Schenk AD, Casta D, Gipson B, Arheit M, Zeng X, Stahlberg H.  2010.  3D Reconstruction from 2D Crystal Image and Diffraction Data. Cryo-EM, Part B: 3-D Reconstruction. 482:101-129.
     Publisher's web site     
2008
Gipson B, Zeng X, Stahlberg H.  2008.  2dx-Automated 3D structure reconstruction from 2D crystal data. Microscopy and Microanalysis. :1290-1291.
     Publisher's web site     
2007
Gipson B, Zeng XY, Stahlberg H, Wouts R.  2007.  2dx – User Friendly Image Processing ( and Merging ) for 2D Crystals. Microscopy and Microanalysis. 13:160–161.
     Publisher's web site     
Gipson B, Zeng X, Stahlberg H.  2007.  2dx_merge : Data management and merging for 2D crystal images. Journal of Structural Biology. 160:375–384.
     Publisher's web site     
Gipson B, Zeng X, Zhang ZY, Stahlberg H.  2007.  2dx–user-friendly image processing for 2D crystals.. Journal of structural biology. 157:64–72.
Abstract           Publisher's web site     
Zeng X, Gipson B, Zheng ZY, Renault L, Stahlberg H.  2007.  Automatic lattice determination for two-dimensional crystal images.. Journal of structural biology. 160:353–61.
Abstract           Publisher's web site     
Chiu PL, Pagel MD, Evans J, Chou HT, Zeng X, Gipson B, Stahlberg H, Nimigean CM.  2007.  The Structure of the Prokaryotic Cyclic Nucleotide-Modulated Potassium Channel MloK1 at 16 A Resolution. Structure. 15:1053–1064.
     Publisher's web site     
2006
Renault L, Chou HT, Chiu PL, Hill RM, Zeng X, Gipson B, Zhang ZY, Cheng A, Unger V, Stahlberg H.  2006.  Milestones in electron crystallography. Journal of computer-aided molecular design. 20:519–527.
     Publisher's web site     
2005
Zhang M, White RA, Wang L, Goldman R, Kavraki LE, Hassett B.  2005.  Improving Conformational Searches by Geometric Screening. Bioinformatics. 21:624-630.
Abstract      Preprint PDF     Publisher's web site     
2002
Zhang M, Kavraki LE.  2002.  Approximating Solutions of Molecular Inverse Kinematics Problems by Subdivision. The 24th International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS) and the Annual Meeting of the Biomedical Engineering Society (BMES). :2182-2183.
Abstract           Publisher's web site     
Zhang M, Kavraki LE.  2002.  Solving Molecular Inverse Kinematics Problems for Protein Folding and Drug Design. Currents in Computational Molecular Biology. :214-215.
Zhang M, Kavraki LE.  2002.  A New Method for Fast and Accurate Derivation of Molecular Conformations. Journal of Chemical Information and Computer Sciences. 42:64-70.
Abstract      Preprint PDF     Publisher's web site     
2001
Zhang M, Kavraki LE.  2001.  Efficiently Maintaining Molecular Conformations Using Local Frames. Currents in Computational Molecular Biology. :97-98.