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A
Yao H, Kristensen DM, Mihalek I, Sowa M, Shaw C, Kimmel M, Kavraki LE, Lichtarge O.  2003.  An Accurate, Sensitive, and Scalable Method to Identify Functional Sites in Protein Structures. Journal of Molecular Biology. 326:255-261.
Abstract           Publisher's web site     
C
Yin J, Dhanik A, Hsu D, Wang Y.  2004.  The Creation of a Music-driven Digital Violinist. ACM international conference on Multimedia. :476-479.
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Dhanik A, Yao P, Marz N, Propper R, Kou C, Liu G, van den Bedem H, Latombe JC.  2007.  Efficient Algorithms to Explore Conformation Spaces of Flexible Protein Loops. 7th Workshop on Algorithms in Bioinformatics (WABI’07). :265-276.
Yao P, Dhanik A, Marz N, Propper R, Kou C, Liu G, van den Bedem H, Latombe JC, Landsbergz IH, Altman RB.  2008.  Efficient Algorithms to Explore Conformation Spaces of Flexible Protein Loops. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 5:534-545.
K
Sucan IA, Kruse JF, Yim M, Kavraki LE.  2008.  Kinodynamic Motion Planning with Hardware Demonstrations. IEEE/RSJ International Conference on Intelligent Robots and Systems. :1661--1666.
Abstract      Preprint PDF     Publisher's web site     
M
Yim M, Shen W-M, Salemi B, Rus D, Moll M, Lipson H, Klavins E.  2007.  Modular Self-reconfigurable Robot Systems: Challenges and Opportunities for the Future. IEEE Robotics & Automation Magazine. 14
Abstract           Publisher's web site     
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LaValle S, Yakey J, Kavraki LE.  1999.  A Probabilistic Roadmap Approach for Systems with Closed Kinematic Chains. Proceedings of The IEEE International Conference on Robotics and Automation (ICRA). 3:1671-1677.
Abstract      Preprint PDF     Publisher's web site     
R
Yakey J, LaValle S, Kavraki LE.  2001.  Randomized Path Planning for Linkages with Closed Kinematics Chains. IEEE Transactions on Robotics and Automation. 17:951-959.
Abstract      Preprint PDF     Publisher's web site     
Finn PW, Kavraki LE, Latombe J-C, Shelton C, Venkatasubramanian S, Yao A.  1998.  RAPID: Randomized Pharmacophore Identification for drug design. Computational Geometry: Theory and Applications. 10(4):263-272.
Abstract      Preprint PDF     Publisher's web site     
Finn PW, Kavraki LE, Latombe J-C, Motwani R, Shelton C, Venkatasubramanian S, Yao A.  1997.  RAPID: Randomized Pharmacophore Identification for drug design. ACM Conference on Computational Geometry. :324-333.
Abstract      Preprint PDF     Publisher's web site     
Sucan IA, Kruse JF, Yim M, Kavraki LE.  2008.  Reconfiguration for modular robots using kinodynamic motion planning. ASME -- Dynamic Systems and Control.