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Fofanov VY, Chen BY, Bryant DH, Moll M, Lichtarge O, Kavraki LE, Kimmel M.  2008.  A Statistical Model to Correct Systematic Bias Introduced by Algorithmic Thresholds in Protein Structural Comparison Algorithms. IEEE Intl. Conf. on Bioinformatics and Biomedicine (BIBM).
Abstract      Preprint PDF     Publisher's web site     
Finn PW, Kavraki LE, Latombe J-C, Motwani R, Shelton C, Venkatasubramanian S, Yao A.  1997.  RAPID: Randomized Pharmacophore Identification for drug design. ACM Conference on Computational Geometry. :324-333.
Abstract      Preprint PDF     Publisher's web site     
Finn PW, Kavraki LE.  1999.  Computational Approaches to Drug Design. Algorithmica. 25:347-371.
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Finn PW, Halperin D, Kavraki LE, Latombe J-C, Motwani R, Shelton C, Venkat S.  1996.  Geometric Manipulation of Flexible Ligands. LNCS Series Applied Computational Geometry - Towards Geometric Engineering. 1148:67-78.
Preprint PDF     Publisher's web site     
Finn PW, Kavraki LE, Latombe J-C, Shelton C, Venkatasubramanian S, Yao A.  1998.  RAPID: Randomized Pharmacophore Identification for drug design. Computational Geometry: Theory and Applications. 10(4):263-272.
Abstract      Preprint PDF     Publisher's web site     
Finn PW, Kavraki LE, Latombe J-C, Motwani R, Venkatasubramanian S.  1997.  Search Techniques for Rational Drug Design. International Conference on Intelligent Information Systems. :2-6.
Abstract           Publisher's web site