The LabelHash Server
1ucnA motif
Motif residues: LYS12 PRO13 GLY92 ARG105 ASN115 GLY118
Table of Top 100 matches
Click here for a compact table with the top 100 matches.The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.
Downloads
- A zip file with PDB files for the top 100 matches and the motif itself.
- An XML file with all matches. You can open this file in Chimera with our ViewMatch plugin.
Top 20 matches
For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.1. 3b54B [pdb]
LRMSD: 1.22992897034p-value: 9.26106658881e-05
Matching residues: LYS13 PRO14 GLY93 ARG106 ASN116 GLY120
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity, protein binding, identical protein binding
Biological process: nucleotide metabolic process, nucleoside triphosphate biosynthetic process, response to DNA damage stimulus, nucleoside diphosphate phosphorylation, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process, DNA repair
Cellular component: mitochondrial intermembrane space, cytoplasm, mitochondrion, cytosol
2. 1ndlC [pdb]
LRMSD: 1.32391965389p-value: 0.000297674530884
Matching residues: LYS13 PRO14 GLY93 ARG106 ASN116 GLY120
EC class: 2.7.4.6
GO terms:
Molecular function: kinase activity, magnesium ion binding, ATP binding, nucleoside diphosphate kinase activity, metal ion binding, transferase activity, nucleotide binding, microtubule binding, GTP binding
Biological process: CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process, nucleotide metabolic process, protein amino acid autophosphorylation, peptidyl-serine phosphorylation, epithelial cell migration, open tracheal system, open tracheal system development, mitosis, microtubule-based process, protein amino acid phosphorylation, nucleoside diphosphate phosphorylation
Cellular component: nuclear microtubule, cytoplasm, microtubule, cytoskeleton
3. 1zs6D [pdb]
LRMSD: 1.33310163021p-value: 0.00033547761268
Matching residues: LYS29 PRO30 GLY109 ARG122 ASN132 GLY136
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity
Biological process: nucleotide metabolic process, apoptosis, induction of apoptosis, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: cytosol
4. 3bbcF [pdb]
LRMSD: 1.33765137196p-value: 0.000355157098966
Matching residues: LYS12 PRO13 GLY92 ARG105 ASN115 GLY119
EC class: 2.7.4.6
GO terms:
Molecular function: transcription factor activity, ATP binding, nucleoside diphosphate kinase activity, metal ion binding, transferase activity, kinase activity, DNA binding, magnesium ion binding, nucleotide binding, protein binding
Biological process: regulation of transcription, regulation of transcription, DNA-dependent, nucleoside triphosphate biosynthetic process, negative regulation of cell proliferation, negative regulation of cell cycle, nucleotide metabolic process, cell cycle, transcription, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process, positive regulation of epithelial cell proliferation, regulation of epidermis development, positive regulation of keratinocyte differentiation, negative regulation of apoptosis, cell adhesion
Cellular component: nucleus, cytoplasm, lamellipodium, ruffle
5. 1w7wF [pdb]
LRMSD: 1.33817732334p-value: 0.000355167721864
Matching residues: LYS11 PRO12 GLY91 ARG104 ASN114 GLY118
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, kinase activity, nucleoside diphosphate kinase activity, ATP binding, nucleotide binding
Biological process: CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
6. 1sp3A [pdb]
LRMSD: 1.3476088047p-value: 0.000375400966732
Matching residues: ASN70 ARG73 GLY114 PRO348 LYS349 GLY352
EC class: 0.0.0.0
GO terms:
7. 1xiqB [pdb]
LRMSD: 1.34883737564p-value: 0.000375426228857
Matching residues: LYS9 PRO10 GLY89 ARG102 ASN112 GLY116
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, kinase activity, ATP binding, nucleoside diphosphate kinase activity, nucleotide binding
Biological process: CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
8. 1nclA [pdb]
LRMSD: 1.35734057426p-value: 0.000416673690779
Matching residues: LYS16 PRO17 GLY96 ARG109 ASN119 GLY123
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity
Biological process: nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: cytoplasm
9. 1u8wB [pdb]
LRMSD: 1.3617824316p-value: 0.000416766590206
Matching residues: LYS9 PRO10 GLY89 ARG102 ASN112 GLY116
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity
Biological process: response to cadmium ion, response to salt stress, nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: apoplast, chloroplast, plasma membrane, vacuole
10. 1nb2A [pdb]
LRMSD: 1.36494469643p-value: 0.000437622424215
Matching residues: LYS10 PRO11 GLY90 ARG103 ASN113 GLY117
EC class: 0.0.0.0
GO terms:
Molecular function: ATP binding, nucleoside diphosphate kinase activity
Biological process: CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
11. 2vu5A [pdb]
LRMSD: 1.369176507p-value: 0.000458789116237
Matching residues: LYS9 PRO10 GLY89 ARG102 ASN112 GLY116
EC class: 0.0.0.0
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity
Biological process: nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: cytoplasm
12. 1bhnE [pdb]
LRMSD: 1.370921731p-value: 0.000458826514659
Matching residues: LYS12 PRO13 GLY92 ARG105 ASN115 GLY119
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity, protein binding
Biological process: nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process, endocytosis, nervous system development, cell differentiation
Cellular component: plasma membrane, cytoplasm, membrane, nucleus, mitochondrion
13. 1wklB [pdb]
LRMSD: 1.37674510479p-value: 0.000480257876916
Matching residues: LYS9 PRO10 GLY89 ARG102 ASN112 GLY116
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity
Biological process: nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: cytoplasm
14. 2hveB [pdb]
LRMSD: 1.3920571804p-value: 0.000523656373844
Matching residues: LYS12 PRO13 GLY92 ARG105 ASN115 GLY119
EC class: 2.7.4.6
GO terms:
Molecular function: protein binding, GTP binding, magnesium ion binding, DNA binding, deoxyribonuclease activity, ATP binding, nucleoside diphosphate kinase activity, metal ion binding, transferase activity, kinase activity, nucleotide binding, identical protein binding
Biological process: positive regulation of DNA binding, regulation of apoptosis, negative regulation of cell proliferation, negative regulation of cell cycle, nucleotide metabolic process, cell cycle, CTP biosynthetic process, UTP biosynthetic process, positive regulation of epithelial cell proliferation, endocytosis, nervous system development, cell differentiation, GTP biosynthetic process
Cellular component: cytoplasm, nucleus
15. 2az3E [pdb]
LRMSD: 1.41166520119p-value: 0.000610361690633
Matching residues: LYS13 PRO14 GLY93 ARG106 ASN116 GLY120
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity
Biological process: nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: cytoplasm
16. 1pkuD [pdb]
LRMSD: 1.45038747787p-value: 0.000735482433811
Matching residues: LYS12 PRO13 GLY92 ARG105 ASN115 GLY119
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity
Biological process: nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
17. 1s57A [pdb]
LRMSD: 1.46399772167p-value: 0.000774396932684
Matching residues: LYS91 PRO92 GLY171 ARG184 ASN194 GLY198
EC class: 2.7.4.6
GO terms:
Molecular function: protein binding, nucleoside diphosphate kinase activity, metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, identical protein binding, nucleotide binding
Biological process: response to hydrogen peroxide, auxin mediated signaling pathway, red, far-red light phototransduction, response to UV, nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: chloroplast envelope, thylakoid, chloroplast stroma, chloroplast, cytoplasm, nucleus, plastid
18. 2nckL [pdb]
LRMSD: 1.46737706661p-value: 0.00077446148498
Matching residues: LYS11 PRO12 GLY91 ARG104 ASN114 GLY118
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity
Biological process: nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: cytoplasm
19. 2hurC [pdb]
LRMSD: 1.50377869606p-value: 0.000881242158357
Matching residues: LYS11 PRO12 GLY91 ARG104 ASN114 GLY118
EC class: 2.7.4.6
GO terms:
Molecular function: metal ion binding, transferase activity, kinase activity, ATP binding, magnesium ion binding, nucleotide binding, nucleoside diphosphate kinase activity, protein binding
Biological process: nucleotide metabolic process, CTP biosynthetic process, UTP biosynthetic process, GTP biosynthetic process
Cellular component: cytoplasm
20. 2ha1A [pdb]
LRMSD: 1.50688421726p-value: 0.000897123187315
Matching residues: ASN16 GLY62 LYS64 PRO65 GLY141 ARG143
EC class: GO terms:
Molecular function: collagen binding, protein binding, extracellular matrix structural constituent, heparin binding
Biological process: transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding, cell migration, cell adhesion, regulation of cell shape, acute-phase response, peptide cross-linking, substrate adhesion-dependent cell spreading
Cellular component: ER-Golgi intermediate compartment, proteinaceous extracellular matrix, extracellular region, platelet alpha granule lumen, fibrinogen complex
