The LabelHash Server
1lbfA motif
Motif residues: GLU51 SER56 PRO57 PHE89 GLY91 PHE112 GLU159 ASN180 SER211 GLY233
Table of Top 100 matches
Click here for a compact table with the top 100 matches.The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.
Downloads
- A zip file with PDB files for the top 100 matches and the motif itself.
- An XML file with all matches. You can open this file in Chimera with our ViewMatch plugin.
Top 20 matches
For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.1. 1a53A [pdb]
LRMSD: 0.110056616366p-value: 3.1335024687e-05
Matching residues: GLU51 SER56 PRO57 PHE89 GLY91 PHE112 GLU159 ASN180 SER211 GLY233
EC class: 4.1.1.48
GO terms:
Molecular function: carboxy-lyase activity, lyase activity, indole-3-glycerol-phosphate synthase activity, catalytic activity
Biological process: aromatic amino acid family biosynthetic process, cellular amino acid biosynthetic process, tryptophan biosynthetic process, metabolic process, tryptophan metabolic process
2. 1vc4B [pdb]
LRMSD: 0.245601266623p-value: 7.52011692384e-05
Matching residues: GLU51 SER56 PRO57 PHE91 GLY93 PHE114 GLU160 ASN181 SER215 GLY236
EC class: 0.0.0.0
GO terms:
Molecular function: indole-3-glycerol-phosphate synthase activity, catalytic activity
Biological process: metabolic process
3. 1i4nA [pdb]
LRMSD: 0.543743848801p-value: 0.000156693160534
Matching residues: GLU47 SER52 PRO53 PHE87 GLY89 PHE110 GLU157 ASN179 SER210 GLY231
EC class: 4.1.1.48
GO terms:
Molecular function: carboxy-lyase activity, lyase activity, indole-3-glycerol-phosphate synthase activity, catalytic activity
Biological process: aromatic amino acid family biosynthetic process, cellular amino acid biosynthetic process, tryptophan biosynthetic process, metabolic process, tryptophan metabolic process
4. 1j5tA [pdb]
LRMSD: 0.57919883728p-value: 0.000170908067957
Matching residues: GLU25 SER30 PRO31 PHE65 GLY67 PHE88 GLU135 ASN157 SER188 GLY209
EC class: 4.1.1.48
GO terms:
Molecular function: carboxy-lyase activity, lyase activity, indole-3-glycerol-phosphate synthase activity, catalytic activity
Biological process: aromatic amino acid family biosynthetic process, cellular amino acid biosynthetic process, tryptophan biosynthetic process, metabolic process, tryptophan metabolic process
5. 2gqfA [pdb]
LRMSD: 2.62241315842p-value: 0.000267737865215
Matching residues: SER195 PHE234 GLY238 SER240 PRO242 ASN249 GLU255 PHE330 GLU336 GLY337
EC class: GO terms:
Molecular function: electron carrier activity, oxidoreductase activity
6. 1egvL [pdb]
LRMSD: 2.71881628036p-value: 0.000328608002746
Matching residues: PRO138 SER139 GLY165 PHE166 GLU170 SER333 ASN334 GLY363 GLU379 PHE384
EC class: 0.0.0.0
GO terms:
Molecular function: lyase activity, propanediol dehydratase activity, lyase activity, propanediol dehydratase activity, lyase activity, propanediol dehydratase activity, cobalamin binding, hydro-lyase activity, catalytic activity
Biological process: metabolic process
7. 1m1oB [pdb]
LRMSD: 2.77013778687p-value: 0.000378682801966
Matching residues: GLY20 PHE22 PRO26 SER118 GLU198 PHE202 GLU217 GLY347 SER353 ASN359
EC class: 2.3.1.9
GO terms:
Molecular function: transferase activity, acyltransferase activity, acetyl-CoA C-acetyltransferase activity, catalytic activity
Biological process: poly-hydroxybutyrate biosynthetic process, metabolic process
Cellular component: cytoplasm
8. 2hu0D [pdb]
LRMSD: 2.82991242409p-value: 0.000466778990813
Matching residues: ASN104 SER105 GLU119 GLU165 GLY351 PHE374 SER404 GLY441 PHE446 PRO459
EC class: 0.0.0.0
GO terms:
Molecular function: hydrolase activity, acting on glycosyl bonds, hydrolase activity, exo-alpha-sialidase activity
Biological process: metabolic process, carbohydrate metabolic process
Cellular component: virion membrane, apical plasma membrane, virion, integral to membrane, membrane, plasma membrane
9. 1jfrA [pdb]
LRMSD: 2.86671614647p-value: 0.000530440534931
Matching residues: GLU6 GLY8 ASN13 SER15 GLY55 PRO75 SER79 PHE82 PHE230 GLU238
EC class: 0.0.0.0
GO terms:
Molecular function: hydrolase activity
10. 2qm0A [pdb]
LRMSD: 2.88350892067p-value: 0.000559453619644
Matching residues: PHE178 SER180 PRO182 GLY216 SER217 ASN228 GLU232 PHE244 GLU248 GLY265
EC class: 0.0.0.0
GO terms:
11. 3b7eA [pdb]
LRMSD: 2.90544080734p-value: 0.000622638093773
Matching residues: ASN104 GLU119 GLU165 GLY363 PHE374 SER404 GLY441 SER442 PHE446 PRO459
EC class: 3.2.1.18
GO terms:
Molecular function: metal ion binding, hydrolase activity, acting on glycosyl bonds, hydrolase activity, calcium ion binding, exo-alpha-sialidase activity
Biological process: metabolic process, carbohydrate metabolic process
Cellular component: virion membrane, apical plasma membrane, virion, integral to membrane, membrane, plasma membrane
12. 2ivfA [pdb]
LRMSD: 2.95029044151p-value: 0.000736314628739
Matching residues: SER91 GLY196 SER197 ASN487 GLU660 PRO664 PHE670 GLU742 PHE753 GLY766
EC class: 0.0.0.0
GO terms:
Molecular function: iron-sulfur cluster binding, electron carrier activity, metal ion binding, molybdenum ion binding, oxidoreductase activity, binding, heme binding
Biological process: oxidation reduction, oxidation reduction
Cellular component: periplasmic space
13. 3fkjA [pdb]
LRMSD: 2.95453047752p-value: 0.000756911118515
Matching residues: SER2 ASN7 PHE42 PRO132 GLU146 GLU159 GLY165 SER168 GLY290 PHE293
EC class: 0.0.0.0
GO terms:
Molecular function: isomerase activity, sugar binding
Biological process: carbohydrate metabolic process
14. 2as0B [pdb]
LRMSD: 2.98627638817p-value: 0.000846525945235
Matching residues: PRO35 GLY52 PHE53 GLU105 GLY111 SER127 PHE133 GLU153 ASN155 SER159
EC class: 0.0.0.0
GO terms:
Molecular function: RNA binding
15. 2e3tA [pdb]
LRMSD: 2.9946744442p-value: 0.000870721123647
Matching residues: GLU802 PRO841 PHE864 SER865 GLY868 GLU871 GLY898 SER907 ASN908 PHE914
EC class: 1.17.3.2, 1.17.1.4
GO terms:
Molecular function: 2 iron, 2 sulfur cluster binding, iron-sulfur cluster binding, metal ion binding, molybdenum ion binding, oxidoreductase activity, iron ion binding, xanthine oxidase activity, xanthine dehydrogenase activity, catalytic activity, FAD binding, electron carrier activity
Biological process: oxidation reduction, lactation, response to aluminum ion, regulation of epithelial cell differentiation, bone resorption
Cellular component: peroxisome, cytosol
16. 2jkrU [pdb]
LRMSD: 3.01304721832p-value: 0.000947199179791
Matching residues: SER180 ASN182 PHE287 PHE311 GLY360 GLU391 PRO396 SER397 GLY426 GLU432
EC class: GO terms:
Molecular function: protein binding, extracellular matrix structural constituent, protein homodimerization activity, glycoprotein binding, zinc ion binding, protein kinase binding, MHC class II protein binding, coreceptor activity, transmembrane receptor activity, receptor activity, protein binding, lipid binding, protein transporter activity, protein binding, protein transporter activity, protein binding, binding, lipid binding, protein binding, protein transporter activity, binding
Biological process: cell adhesion, immune response, positive regulation of T cell activation, positive regulation of calcium-mediated signaling, positive regulation of peptidyl-tyrosine phosphorylation, cell surface receptor linked signal transduction, cytokine production, protein amino acid N-linked glycosylation, response to protein stimulus, conjugation with cellular fusion, regulation of T cell activation, positive regulation of protein kinase activity, positive regulation of interleukin-2 biosynthetic process, T cell selection, T cell differentiation, transmembrane receptor protein tyrosine kinase signaling pathway, immune response, interspecies interaction between organisms, initiation of viral infection, enzyme linked receptor protein signaling pathway, cell surface receptor linked signal transduction, signal transduction, cell adhesion, positive regulation of T cell activation, positive regulation of calcium-mediated signaling, positive regulation of peptidyl-tyrosine phosphorylation, cytokine production, protein amino acid N-linked glycosylation, response to protein stimulus, vesicle-mediated transport, intracellular protein transport, transport, vesicle-mediated transport, protein transport, intracellular protein transport, transport, vesicle-mediated transport, protein transport, intracellular protein transport, endocytosis, transport, regulation of defense response to virus by virus, vesicle-mediated transport, protein transport, intracellular protein transport
Cellular component: integral to membrane, membrane, external side of plasma membrane, plasma membrane, endoplasmic reticulum lumen, cell surface, membrane raft, AP-2 adaptor complex, T cell receptor complex, plasma membrane, integral to membrane, membrane, endoplasmic reticulum membrane, early endosome, external side of plasma membrane, endoplasmic reticulum lumen, endoplasmic reticulum membrane, cell surface, membrane raft, plasma membrane, membrane, coated pit, transport vesicle, clathrin vesicle coat, clathrin coat of coated pit, clathrin adaptor complex, plasma membrane, membrane, coated pit, membrane coat, membrane, plasma membrane, coated pit, secretory granule, membrane coat, clathrin adaptor complex, plasma membrane, membrane, coated pit, cytosol, clathrin adaptor complex, membrane coat
17. 2znhB [pdb]
LRMSD: 3.01478171349p-value: 0.00094724498922
Matching residues: SER79 PRO80 SER191 ASN192 GLU195 PHE221 GLU326 GLY328 PHE422 GLY424
EC class: GO terms:
Molecular function: peptidase inhibitor activity, protease binding, serine-type endopeptidase inhibitor activity, protein binding, heparin binding, endopeptidase inhibitor activity
Biological process: blood coagulation
Cellular component: extracellular space, extracellular region, plasma membrane
18. 2gtaD [pdb]
LRMSD: 3.01828980446p-value: 0.000973557820544
Matching residues: GLU12 GLU22 GLY23 PHE25 SER26 PRO27 PHE72 ASN79 SER80 GLY110
EC class: GO terms:
19. 1sb7A [pdb]
LRMSD: 3.02856278419p-value: 0.00100083788857
Matching residues: PHE27 GLY155 GLY161 SER309 ASN311 GLU319 PRO325 SER328 PHE329 GLU336
EC class: GO terms:
Molecular function: isomerase activity, pseudouridine synthase activity, RNA binding, protein binding
Biological process: RNA modification, tRNA processing, tRNA pseudouridine synthesis, pseudouridine synthesis
20. 2z2oD [pdb]
LRMSD: 3.05825233459p-value: 0.00111801957246
Matching residues: PRO101 ASN138 SER141 SER144 PHE145 PHE156 GLU175 GLY184 GLY187 GLU200
EC class: GO terms:
Molecular function: metal ion binding, lyase activity, magnesium ion binding, carbon-oxygen lyase activity, catalytic activity
Biological process: response to antibiotic, antibiotic catabolic process
