The LabelHash Server

Top 100 matches

For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.
Download a zip file with PDB files for all the matches and the motif itself.

PDB ID	LRMSD / p-value	Matching Residues	EC	Gene Ontology annotations
1k97A	[pdb]	0.155417 2.43562e-05	106^ARG 139^PHE 202^GLU 286^LYS 288^ARG 331^TYR	6.3.4.5	cellular amino acid biosynthetic process arginine biosynthetic process	cytoplasm	ligase activity ATP binding nucleotide binding argininosuccinate synthase activity protein binding
2nz2A	[pdb]	0.398302 9.25892e-05	95^ARG 128^PHE 191^GLU 277^LYS 279^ARG 322^TYR	6.3.4.5	cellular amino acid biosynthetic process arginine biosynthetic process urea cycle	cytoplasm	ligase activity ATP binding nucleotide binding argininosuccinate synthase activity protein binding
1kh1B	[pdb]	0.449406 0.000116814	92^ARG 125^PHE 184^GLU 265^LYS 267^ARG 310^TYR	6.3.4.5	cellular amino acid biosynthetic process arginine biosynthetic process	cytoplasm	ligase activity ATP binding nucleotide binding argininosuccinate synthase activity
1vl2B	[pdb]	0.589451 0.000178386	93^ARG 126^PHE 189^GLU 275^LYS 277^ARG 320^TYR	6.3.4.5	cellular amino acid biosynthetic process arginine biosynthetic process	cytoplasm	ligase activity ATP binding nucleotide binding argininosuccinate synthase activity
1kobA	[pdb]	1.13803 0.000243326	26^TYR 69^ARG 79^PHE 134^GLU 138^ARG 186^LYS	0.0.0.0		ATP binding protein serine/threonine kinase activity protein kinase activity	protein amino acid phosphorylation
1m41B	[pdb]	1.24463 0.000287839	1174^TYR 1208^GLU 1211^ARG 1220^LYS 1226^ARG 1326^PHE	1.14.14.5		oxidation reduction	oxidoreductase activity monooxygenase activity alkanesulfonate monooxygenase activity
2b5wA	[pdb]	1.36488 0.000343455	18^LYS 20^ARG 22^GLU 88^ARG 113^PHE 123^TYR	0.0.0.0		oxidation reduction metabolic process	oxidoreductase activity glucose 1-dehydrogenase activity zinc ion binding binding catalytic activity
2zj8A	[pdb]	1.51197 0.000458617	50^SER 199^ARG 202^LYS 316^PHE 317^ARG 374^TYR		DNA repair	hydrolase activity ATP binding helicase activity nucleotide binding sequence-specific DNA binding ATP-dependent helicase activity protein binding DNA binding nucleic acid binding hydrolase activity acting on acid anhydrides in phosphorus-containing anhydrides	intracellular
2yy3C	[pdb]	1.5509 0.000543997	4^PHE 11^ARG 36^TYR 54^LYS 60^ARG 86^GLU		eukaryotic translation elongation factor 1 complex	translation translational elongation	translation elongation factor activity
1jijA	[pdb]	1.57907 0.000625291	135^SER 138^ARG 142^LYS 178^PHE 183^ARG 211^TYR	0.0.0.0	cytoplasm	ligase activity ATP binding aminoacyl-tRNA ligase activity RNA binding nucleotide binding tyrosine-tRNA ligase activity	translation tyrosyl-tRNA aminoacylation tRNA aminoacylation for protein translation
2yx1A	[pdb]	1.61179 0.000732166	82^LYS 85^ARG 87^GLU 97^TYR 134^PHE 136^ARG
1igoA	[pdb]	1.62275 0.00079735	48^PHE 49^ARG 70^TYR 145^SER 147^ARG 150^LYS	0.0.0.0		hydrolase activity hydrolase activity acting on glycosyl bonds endo-1,4-beta-xylanase activity hydrolase activity hydrolyzing O-glycosyl compounds	metabolic process xylan catabolic process carbohydrate metabolic process
2nqyB	[pdb]	1.63101 0.000833276	48^PHE 49^ARG 70^TYR 146^SER 148^ARG 151^LYS	0.0.0.0		hydrolase activity hydrolase activity acting on glycosyl bonds endo-1,4-beta-xylanase activity hydrolase activity hydrolyzing O-glycosyl compounds	metabolic process xylan catabolic process carbohydrate metabolic process
2olsA	[pdb]	1.63646 0.000833484	648^PHE 650^ARG 695^TYR 740^SER 743^ARG 747^LYS	2.7.9.2		metal ion binding transferase activity kinase activity ATP binding magnesium ion binding nucleotide binding pyruvate water dikinase activity transferase activity transferring phosphorus-containing groups catalytic activity	phosphorylation gluconeogenesis
3ck8A	[pdb]	1.64436 0.000910696	307^ARG 332^LYS 386^TYR 404^PHE 487^ARG 492^GLU	0.0.0.0
1gl9B	[pdb]	1.65677 0.000951435	781^SER 785^ARG 788^LYS 802^PHE 848^ARG 880^TYR	5.99.1.3	DNA unwinding during replication DNA topological change DNA metabolic process	chromosome	metal ion binding isomerase activity hydrolase activity zinc ion binding ATP binding helicase activity DNA topoisomerase activity DNA binding nucleotide binding DNA topoisomerase (ATP-hydrolyzing) activity ATP-dependent helicase activity DNA topoisomerase type I activity nucleic acid binding
2on7D	[pdb]	1.66974 0.00103981	129^ARG 132^PHE 162^GLU 178^TYR 187^LYS 189^ARG
1qh6B	[pdb]	1.67129 0.00103988	48^PHE 49^ARG 70^TYR 146^SER 148^ARG 151^LYS	0.0.0.0		hydrolase activity hydrolase activity acting on glycosyl bonds endo-1,4-beta-xylanase activity hydrolase activity hydrolyzing O-glycosyl compounds	metabolic process xylan catabolic process carbohydrate metabolic process
1wmiA	[pdb]	1.67346 0.00108771	4^ARG 6^LYS 34^GLU 40^GLU 43^GLU 57^ILE	0.0.0.0
2qm3A	[pdb]	1.67586 0.00108783	233^ARG 235^PHE 244^LYS 247^ARG 323^GLU 331^TYR	0.0.0.0
2b5dX	[pdb]	1.68354 0.00113863	87^LYS 91^ARG 95^GLU 106^TYR 259^ARG 261^PHE
2zgiC	[pdb]	1.70177 0.00130799	112^ARG 124^ARG 126^LYS 133^TYR 146^PHE 177^GLU	0.0.0.0		lyase activity catalytic activity	metabolic process
1gtmB	[pdb]	1.71069 0.00137074	195^SER 199^ARG 203^LYS 331^PHE 385^TYR 396^ARG	1.4.1.3	cytoplasm	oxidation reduction metabolic process cellular amino acid metabolic process	oxidoreductase activity glutamate dehydrogenase [NAD(P)+] activity binding catalytic activity oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor
1f28B	[pdb]	1.71259 0.00137087	43^SER 45^ARG 47^LYS 56^ARG 58^PHE 285^TYR	2.1.1.45		nucleotide biosynthetic process dTMP biosynthetic process	transferase activity methyltransferase activity thymidylate synthase activity
2c5eB	[pdb]	1.7166 0.00143655	22^TYR 41^SER 45^ARG 48^LYS 138^PHE 197^ARG	5.1.3.18		L-ascorbic acid biosynthetic process cellular metabolic process metabolic process	NAD or NADH binding GDP-mannose 3,5-epimerase activity isomerase activity nucleotide binding coenzyme binding binding catalytic activity
1u69D	[pdb]	1.71981 0.00143677	22^TYR 54^PHE 55^ARG 77^SER 109^ARG 111^LYS	0.0.0.0
3ffhB	[pdb]	1.74047 0.00164647	290^LYS 291^ARG 298^TYR 304^PHE 340^ARG 357^GLU	2.6.1.9		cellular amino acid biosynthetic process histidine biosynthetic process biosynthetic process	transferase activity transaminase activity histidinol-phosphate transaminase activity pyridoxal phosphate binding transferase activity transferring nitrogenous groups catalytic activity
2dckA	[pdb]	1.7459 0.00172289	47^PHE 48^ARG 69^TYR 145^SER 147^ARG 150^LYS	0.0.0.0		hydrolase activity hydrolase activity acting on glycosyl bonds endo-1,4-beta-xylanase activity carbohydrate binding hydrolase activity hydrolyzing O-glycosyl compounds	metabolic process xylan catabolic process carbohydrate metabolic process
2on5G	[pdb]	1.74808 0.00172307	129^ARG 132^PHE 162^GLU 175^TYR 187^LYS 189^ARG
3bm3A	[pdb]	1.75142 0.00172334	162^LYS 164^ARG 165^GLU 187^PHE 211^ARG 213^TYR		DNA restriction-modification system	endonuclease activity Type II site-specific deoxyribonuclease activity DNA binding	nucleus
1orrA	[pdb]	1.75597 0.00180354	123^SER 127^LYS 191^ARG 196^TYR 199^ARG 201^PHE	5.1.3.10		isomerase activity CDP-abequose epimerase activity coenzyme binding binding catalytic activity	lipopolysaccharide biosynthetic process cellular metabolic process metabolic process
1f5jA	[pdb]	1.76606 0.00188823	46^PHE 47^ARG 66^TYR 142^SER 144^ARG 147^LYS	0.0.0.0		hydrolase activity acting on glycosyl bonds hydrolase activity endo-1,4-beta-xylanase activity carbohydrate binding hydrolase activity hydrolyzing O-glycosyl compounds	xylan catabolic process metabolic process carbohydrate metabolic process
1htyA	[pdb]	1.77085 0.00197665	47^GLU 51^ARG 206^PHE 228^ARG 231^TYR 821^LYS	3.2.1.114	Golgi membrane integral to membrane membrane Golgi apparatus Golgi stack endoplasmic reticulum	metabolic process mannose metabolic process carbohydrate metabolic process	metal ion binding hydrolase activity acting on glycosyl bonds hydrolase activity zinc ion binding mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity cation binding carbohydrate binding mannosidase activity alpha-mannosidase activity catalytic activity hydrolase activity hydrolyzing O-glycosyl compounds
1up7F	[pdb]	1.77368 0.00206924	79^PHE 80^ARG 123^TYR 147^GLU 150^ARG 157^LYS	3.2.1.86		metabolic process carbohydrate metabolic process	metal ion binding manganese ion binding hydrolase activity acting on glycosyl bonds hydrolase activity 6-phospho-beta-glucosidase activity binding hydrolase activity hydrolyzing O-glycosyl compounds catalytic activity
1we5A	[pdb]	1.77381 0.00206925	153^ARG 163^TYR 168^ARG 169^PHE 227^LYS 231^SER			hydrolase activity acting on glycosyl bonds hydrolase activity hydrolase activity hydrolyzing O-glycosyl compounds protein binding	metabolic process carbohydrate metabolic process
2w8bE	[pdb]	1.77395 0.00206927	78^TYR 81^ARG 84^PHE 112^ARG 150^LYS 160^GLU	0.0.0.0		bacteriocin transport protein transport transport protein import	periplasmic space cell outer membrane membrane plasma membrane integral to membrane
3fqdB	[pdb]	1.79195 0.00226959	245^LYS 260^TYR 271^ARG 277^ARG 285^GLU 290^PHE		5'-3' exoribonuclease activity hydrolase activity exonuclease activity nuclease activity nucleic acid binding	nucleus cytosol nucleus intracellular	regulation of transcription regulation of transcription mRNA processing rRNA processing regulation of transcription DNA-dependent transcription termination transcription chromosome segregation RNA processing mRNA processing rRNA processing regulation of transcription DNA-dependent transcription termination transcription nucleobase nucleoside nucleotide and nucleic acid metabolic process
2v6eB	[pdb]	1.79228 0.00226962	447^ARG 453^LYS 479^GLU 492^ARG 496^PHE 504^TYR	0.0.0.0
1h70A	[pdb]	1.79423 0.00226983	2^PHE 169^TYR 222^ARG 224^LYS 234^GLU 253^ARG	0.0.0.0		cytoplasm	hydrolase activity acting on carbon-nitrogen (but not peptide) bonds in linear amidines
2vlaA	[pdb]	1.80535 0.0024867	115^PHE 136^ARG 140^TYR 157^LYS 218^GLU 224^ARG	0.0.0.0			endonuclease activity
1vpqA	[pdb]	1.80608 0.00248678	189^TYR 191^ARG 226^GLU 230^ARG 232^LYS 238^PHE	0.0.0.0
2gx5C	[pdb]	1.80621 0.0024868	47^LYS 67^GLU 69^ARG 75^TYR 103^ARG 106^PHE	0.0.0.0	GTP binding DNA binding nucleotide binding transcription repressor activity	cytoplasm	regulation of transcription regulation of transcription DNA-dependent transcription negative regulation of transcription DNA-dependent
2pk3B	[pdb]	1.80665 0.00248685	67^PHE 108^ARG 130^GLU 227^TYR 282^ARG 284^LYS	0.0.0.0		cellular metabolic process metabolic process	coenzyme binding binding catalytic activity
1gvhA	[pdb]	1.80807 0.00248701	150^GLU 153^ARG 184^ARG 217^TYR 244^LYS 253^PHE	1.14.12.17	cytoplasm	metal ion binding oxidoreductase activity iron ion binding oxygen transporter activity nitric oxide dioxygenase activity heme binding oxygen binding electron carrier activity	oxidation reduction oxygen transport response to toxin transport
1zavA	[pdb]	1.81067 0.00259902	26^GLU 39^HOH 43^HOH 47^HOH 100^HOH 112^ARG		ribonucleoprotein complex ribosome intracellular ribonucleoprotein complex ribosome intracellular	structural constituent of ribosome structural constituent of ribosome	translation ribosome biogenesis translation
2cagA	[pdb]	1.81458 0.00259948	56^LYS 61^PHE 237^ARG 239^SER 299^ARG 304^TYR	1.11.1.6	cytoplasm	metal ion binding oxidoreductase activity iron ion binding peroxidase activity catalase activity heme binding	oxidation reduction hydrogen peroxide catabolic process response to oxidative stress
2zkrm	[pdb]	1.81861 0.00271701	63^TYR 119^GLY 129^PRO 160^HIS 169^SER 170^ALA		rRNA binding structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome RNA binding structural constituent of ribosome transcription regulator activity structural constituent of ribosome protein binding rRNA binding RNA binding structural constituent of ribosome rRNA binding RNA binding structural constituent of ribosome structural constituent of ribosome protein binding structural constituent of ribosome mRNA binding protein binding structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome RNA binding structural constituent of ribosome metal ion binding rRNA binding RNA binding structural constituent of ribosome structural constituent of ribosome zinc ion binding structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome 5S rRNA binding structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome nucleotide binding structural constituent of ribosome	ribonucleoprotein complex ribonucleoprotein complex ribonucleoprotein complex intracellular ribosome ribonucleoprotein complex ribonucleoprotein complex ribonucleoprotein complex ribonucleoprotein complex ribosome cytosolic ribosome intracellular ribonucleoprotein complex ribosome intracellular ribonucleoprotein complex ribosome cytosolic large ribosomal subunit large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome intracellular nucleolus ribonucleoprotein complex ribosome cytosol cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosol cytosolic large ribosomal subunit intracellular ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosol cytosolic large ribosomal subunit nucleolus intracellular ribonucleoprotein complex ribosome large ribosomal subunit intracellular ribonucleoprotein complex ribosome intracellular cytosolic large ribosomal subunit ribonucleoprotein complex ribosome cytosol intracellular ribonucleoprotein complex ribosome intracellular ribonucleoprotein complex ribosome intracellular ribonucleoprotein complex ribosome cytosol large ribosomal subunit intracellular ribosome large ribosomal subunit intracellular ribosome intracellular ribosome intracellular ribosome intracellular ribosome intracellular ribosome intracellular ribonucleoprotein complex ribosome intracellular ribosome intracellular ribosome intracellular ribosome intracellular ribosome intracellular ribosome intracellular ribosome intracellular	translation translation translation translation translation protein targeting ribosomal large subunit biogenesis rRNA processing translational elongation translation translational elongation translation translation translational elongation translation translation translation translation translational elongation translation translation translational elongation translation translation translation translation translation translation translation ribosome biogenesis translation translation translation translation translation retina development in camera-type eye G1/S transition checkpoint retinal ganglion cell axon guidance optic nerve development exit from mitosis translation ribosomal large subunit assembly translational elongation
2vkdC	[pdb]	1.82287 0.00271754	156^SER 158^ARG 168^TYR 173^ARG 458^PHE 535^LYS	0.0.0.0
1vdyA	[pdb]	1.823 0.00271755	52^GLU 57^ARG 66^LYS 75^TYR 85^ARG 129^PHE		intracellular protein transport	membrane	protein binding
1wcuA	[pdb]	1.82571 0.00284047	49^SER 65^TYR 77^LYS 101^PHE 116^ARG 132^ARG	0.0.0.0		carbohydrate metabolic process	hydrolase activity hydrolyzing O-glycosyl compounds
1ot2A	[pdb]	1.8274 0.00284068	21^PHE 24^ARG 103^ARG 106^LYS 112^TYR 142^SER	2.4.1.19	carbohydrate metabolic process	extracellular region	metal ion binding transferase activity transferring glycosyl groups transferase activity calcium ion binding cyclomaltodextrin glucanotransferase activity cation binding carbohydrate binding catalytic activity
1vcnA	[pdb]	1.83958 0.0031048	14^TYR 131^GLU 135^ARG 138^LYS 172^ARG 173^PHE	6.3.4.2		glutamine metabolic process pyrimidine nucleotide biosynthetic process	ligase activity CTP synthase activity catalytic activity nucleotide binding ATP binding
2apcA	[pdb]	1.83967 0.00310481	266^PHE 303^ARG 393^ARG 397^LYS 418^TYR 445^SER	2.4.1.101	Golgi membrane integral to membrane membrane Golgi apparatus	protein amino acid N-linked glycosylation	transferase activity transferring glycosyl groups transferase activity alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
1kruA	[pdb]	1.83988 0.00310484	8^ARG 15^PHE 24^GLU 28^ARG 30^LYS 94^TYR	2.3.1.18	cytoplasm	lactose biosynthetic process	transferase activity acyltransferase activity galactoside O-acetyltransferase activity
2e40A	[pdb]	1.84206 0.00310515	77^ARG 118^PHE 412^TYR 450^GLU 454^ARG 457^LYS	0.0.0.0		carbohydrate metabolic process	cation binding hydrolase activity hydrolyzing O-glycosyl compounds catalytic activity
2owmD	[pdb]	1.84867 0.00324636	194^PHE 202^ARG 228^TYR 368^ARG 370^SER 377^LYS	0.0.0.0	microtubule microtubule associated complex	microtubule-based movement	motor activity ATP binding nucleotide binding microtubule motor activity
2ib5E	[pdb]	1.85116 0.00324672	71^LYS 79^TYR 88^PHE 145^GLU 179^ARG 220^ARG	0.0.0.0			protein-chromophore linkage bioluminescence
1x31D	[pdb]	1.85223 0.00324688	16^GLU 53^PHE 64^ARG 65^LYS 71^ARG 82^TYR	0.0.0.0	cytoplasm	oxidation reduction tetrahydrofolate metabolic process tetrahydrofolate metabolic process metabolic process glycine catabolic process tetrahydrofolate metabolic process	oxidoreductase activity sarcosine oxidase activity oxidoreductase activity electron carrier activity sarcosine oxidase activity binding aminomethyltransferase activity catalytic activity sarcosine oxidase activity
3d3aA	[pdb]	1.8678 0.00370785	271^LYS 316^PHE 443^ARG 567^GLU 613^ARG 618^TYR	0.0.0.0	beta-galactosidase complex	cell adhesion carbohydrate metabolic process	hydrolase activity hydrolyzing O-glycosyl compounds cation binding beta-galactosidase activity catalytic activity
2gagD	[pdb]	1.87605 0.00387502	16^GLU 53^PHE 64^ARG 65^LYS 71^ARG 82^TYR	0.0.0.0	cytoplasm	electron carrier activity oxidoreductase activity oxidoreductase activity sarcosine oxidase activity sarcosine oxidase activity binding aminomethyltransferase activity catalytic activity sarcosine oxidase activity	tetrahydrofolate metabolic process metabolic process glycine catabolic process tetrahydrofolate metabolic process tetrahydrofolate metabolic process
2r4hB	[pdb]	1.87709 0.0038752	17^PHE 23^ARG 24^GLU 30^TYR 33^ARG 61^LYS	0.0.0.0	cell adhesion cell surface receptor linked signal transduction protein complex assembly	cell-cell junction plasma membrane cell junction membrane tight junction	protein binding ATP binding nucleotide binding protein C-terminus binding
1bhgA	[pdb]	1.8794 0.00387559	29^TYR 216^ARG 361^PHE 432^GLU 435^ARG 438^LYS	3.2.1.31	glycosaminoglycan metabolic process metabolic process glycosaminoglycan catabolic process carbohydrate metabolic process	hydrolase activity acting on glycosyl bonds hydrolase activity beta-glucuronidase activity cation binding hydrolase activity hydrolyzing O-glycosyl compounds catalytic activity	lysosome microsome
1i84S	[pdb]	1.8806 0.0038758	721^PHE 729^GLU 731^ARG 750^LYS 767^TYR 777^ARG		muscle thick filament assembly smooth muscle contraction cardiac muscle fiber development elastic fiber assembly striated muscle contraction	myofibril myosin complex striated muscle thick filament cytoplasm myosin complex myosin complex unconventional myosin complex	structural constituent of muscle ATP binding calmodulin binding actin binding motor activity nucleotide binding calcium ion binding motor activity motor activity calcium ion binding actin-dependent ATPase activity structural constituent of muscle
2q6tD	[pdb]	1.88183 0.00404509	208^ARG 318^TYR 343^ARG 346^LYS 384^SER 394^PHE	0.0.0.0		DNA replication	helicase activity ATP binding DNA helicase activity DNA binding
2vxhD	[pdb]	1.88178 0.00404508	151^LYS 163^ARG 166^GLU 183^ARG 186^TYR 200^PHE	0.0.0.0
1ndgB	[pdb]	1.88369 0.00404542	338^ARG 340^PHE 347^TYR 364^LYS 366^ARG 383^SER		antigen binding hydrolase activity acting on glycosyl bonds hydrolase activity catalytic activity lysozyme activity antigen binding	defense response to bacterium cytolysis metabolic process cell wall macromolecule catabolic process positive regulation of B cell activation positive regulation of immune response positive regulation of phagocytosis positive regulation of endocytosis early endosome to late endosome transport regulation of proteolysis immunoglobulin mediated immune response complement activation classical pathway phagocytosis engulfment phagocytosis recognition humoral immune response mediated by circulating immunoglobulin positive regulation of type I hypersensitivity positive regulation of type IIa hypersensitivity antibody-dependent cellular cytotoxicity antigen processing and presentation endosome to lysosome transport	extracellular region integral to membrane membrane plasma membrane immunoglobulin complex circulating multivesicular body
3eh1A	[pdb]	1.88675 0.00404595	1152^LYS 1155^ARG 1156^GLU 1168^TYR 1211^ARG 1213^PHE		perinuclear region of cytoplasm endoplasmic reticulum membrane cytoplasm Golgi membrane membrane Golgi apparatus endoplasmic reticulum COPII vesicle coat	transporter activity zinc ion binding protein binding	vesicle-mediated transport protein transport transport membrane organization ER to Golgi vesicle-mediated transport intracellular protein transport
2a52D	[pdb]	1.88701 0.00404599	71^LYS 79^TYR 88^PHE 145^GLU 179^ARG 220^ARG				protein-chromophore linkage bioluminescence
2nraC	[pdb]	1.89009 0.00421896	16^ARG 37^TYR 50^GLU 53^ARG 136^LYS 155^PHE		DNA replication DNA replication initiation	DNA-directed DNA polymerase activity	extrachromosomal circular DNA
2j4oA	[pdb]	1.89594 0.00422002	55^LYS 57^ARG 58^SER 104^ARG 110^PHE 179^TYR		activation of MAPKKK activity	cytosol	enzyme activator activity catalytic activity protein binding
3cfaH	[pdb]	1.89596 0.00422002	71^LYS 79^TYR 88^PHE 145^GLU 179^ARG 219^ARG				protein-chromophore linkage bioluminescence
1k5gA	[pdb]	1.89767 0.00439944	29^LEU 35^LYS 94^PRO 127^LEU 129^LEU 155^ALA		perinuclear region of cytoplasm nuclear pore chromatin cytoplasm melanosome nucleus cytosol nucleoplasm cytoplasm nuclear membrane cytosol cytoplasm nucleus centrosome	positive regulation of transcription DNA-dependent androgen receptor signaling pathway signal transduction mitosis mitotic spindle organization protein export from nucleus RNA export from nucleus DNA metabolic process interspecies interaction between organisms protein transport transport nucleocytoplasmic transport intracellular protein transport kinetochore organization Ran protein signal transduction chromatin silencing at centromere chromosome segregation nucleocytoplasmic transport chromatin silencing at telomere signal transduction intracellular transport positive regulation of mitotic centrosome separation spindle organization	protein binding androgen receptor binding transcription coactivator activity GTPase activity GTP binding chromatin binding nucleotide binding Ran GTPase activator activity GTPase activator activity GTPase activator activity Ran GTPase binding GDP-dissociation inhibitor activity protein binding
2eg4B	[pdb]	1.89763 0.00439943	35^LYS 37^ARG 43^GLU 190^TYR 201^PHE 212^ARG	0.0.0.0		sulfate transport	transferase activity thiosulfate sulfurtransferase activity
3eb7B	[pdb]	1.89762 0.00439943	269^ARG 270^PHE 306^TYR 331^SER 335^ARG 337^LYS	0.0.0.0		receptor binding	sporulation resulting in formation of a cellular spore pathogenesis defense response
3cb8A	[pdb]	1.89912 0.00439971	108^PHE 148^ARG 155^TYR 185^GLU 188^ARG 195^LYS		catalytic activity 4 iron 4 sulfur cluster binding iron-sulfur cluster binding metal ion binding oxidoreductase activity iron ion binding [formate-C-acetyltransferase]-activating enzyme activity	cytoplasm	oxidation reduction glucose metabolic process carbohydrate metabolic process oxygen and reactive oxygen species metabolic process
2veaA	[pdb]	1.90024 0.00439992	157^TYR 172^ARG 191^LYS 272^SER 308^PHE 310^ARG	2.7.13.3	membrane	protein histidine kinase activity red or far-red light photoreceptor activity transferase activity kinase activity photoreceptor activity receptor activity G-protein coupled photoreceptor activity ATP binding signal transducer activity two-component sensor activity identical protein binding protein binding nucleotide binding	response to red or far red light protein amino acid autophosphorylation red far-red light phototransduction protein-chromophore linkage response to stimulus regulation of transcription peptidyl-histidine phosphorylation sensory perception signal transduction regulation of transcription DNA-dependent
3fvyA	[pdb]	1.90168 0.00440019	573^PHE 577^ARG 619^GLU 623^ARG 629^LYS 641^TYR	3.4.14.4	cytoplasm	metal ion binding hydrolase activity zinc ion binding metallopeptidase activity peptidase activity aminopeptidase activity dipeptidyl-peptidase activity	proteolysis
2exhB	[pdb]	1.90226 0.0044003	12^PHE 384^ARG 393^GLU 412^TYR 464^ARG 473^LYS	0.0.0.0		carbohydrate metabolic process	hydrolase activity hydrolyzing O-glycosyl compounds
1g6iA	[pdb]	1.9043 0.00458652	232^GLU 233^ARG 240^LYS 255^TYR 270^PHE 273^ARG	3.2.1.113	endoplasmic reticulum membrane integral to membrane membrane endoplasmic reticulum	hydrolase activity acting on glycosyl bonds hydrolase activity calcium ion binding mannosyl-oligosaccharide 1,2-alpha-mannosidase activity protein binding	metabolic process ER-associated protein catabolic process protein amino acid N-linked glycosylation
1sazA	[pdb]	1.90444 0.00458655	210^PHE 214^ARG 250^TYR 258^GLU 262^ARG 271^LYS	2.7.2.7	cytoplasm intracellular	phosphorylation metabolic process	transferase activity kinase activity butyrate kinase activity phosphotransferase activity carboxyl group as acceptor ATP binding nucleotide binding
1j0kA	[pdb]	1.90474 0.00458661	14^PHE 18^TYR 26^ARG 133^LYS 505^ARG 507^GLU	3.2.1.135		metabolic process carbohydrate metabolic process	metal ion binding hydrolase activity acting on glycosyl bonds hydrolase activity calcium ion binding neopullulanase activity cation binding hydrolase activity hydrolyzing O-glycosyl compounds catalytic activity
2egiC	[pdb]	1.91177 0.00478063	33^ARG 36^PHE 44^TYR 83^SER 84^ARG 120^LYS				hydrolase activity
2p5iA	[pdb]	1.91609 0.0047815	17^PHE 35^TYR 45^LYS 53^ARG 112^GLU 172^ARG	0.0.0.0		catalytic activity	protein modification process
2bvmA	[pdb]	1.91776 0.00478183	155^GLU 158^ARG 168^TYR 173^ARG 459^PHE 535^LYS				pathogenesis
2ppqA	[pdb]	1.91781 0.00478185	164^LYS 167^ARG 168^GLU 270^ARG 301^TYR 307^PHE	2.7.1.39		nucleotide binding ATP binding transferase activity kinase activity homoserine kinase activity	threonine biosynthetic process cellular amino acid biosynthetic process
1s1iE	[pdb]	1.91945 0.00498171	99^ASN 158^ARG 180^ASN 216^THR 218^ASP 224^GLN		cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit large ribosomal subunit intracellular intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit nucleus intracellular intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit large ribosomal subunit cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular cytoplasm ribonucleoprotein complex ribosome cytosolic large ribosomal subunit intracellular	structural constituent of ribosome structural constituent of ribosome protein binding structural constituent of ribosome structural constituent of ribosome transcription regulator activity protein binding rRNA binding RNA binding structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome RNA binding structural constituent of ribosome protein binding rRNA binding RNA binding structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome protein binding structural constituent of ribosome rRNA binding RNA binding structural constituent of ribosome metal ion binding rRNA binding zinc ion binding RNA binding structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome RNA binding structural constituent of ribosome metal ion binding zinc ion binding structural constituent of ribosome structural constituent of ribosome RNA binding RNA binding structural constituent of ribosome structural constituent of ribosome RNA binding rRNA binding RNA binding structural constituent of ribosome 5S rRNA binding structural constituent of ribosome RNA binding rRNA binding structural constituent of ribosome RNA binding rRNA binding RNA binding structural constituent of ribosome nucleotide binding structural constituent of ribosome RNA binding structural constituent of ribosome structural constituent of ribosome structural constituent of ribosome	translation translation ribosomal large subunit assembly response to cycloheximide response to antibiotic translation translation response to drug translation regulation of translational fidelity translation translation translation translation ribosomal large subunit assembly translation ribosomal large subunit assembly translation translation ribosome biogenesis translation translation ribosomal large subunit assembly translation translation regulation of translational fidelity translation translation ribosomal large subunit assembly translation translation translation translation translation ribosomal large subunit assembly response to cycloheximide response to antibiotic translation translational termination translation RNA processing translation ribosomal large subunit assembly translation translation response to drug translation translation
1a05A	[pdb]	1.92023 0.00498188	140^TYR 145^ARG 157^PHE 190^LYS 195^GLU 198^ARG	1.1.1.85	NAD or NADH binding metal ion binding oxidoreductase activity magnesium ion binding 3-isopropylmalate dehydrogenase activity oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor	cytoplasm	oxidation reduction leucine biosynthetic process branched chain family amino acid biosynthetic process cellular amino acid biosynthetic process metabolic process
1nezA	[pdb]	1.92091 0.00498202	27^GLU 35^GLY 36^CYS 55^TYR 165^LYS 170^ARG		extracellular region MHC class I protein complex membrane integral to membrane cell surface external side of plasma membrane membrane MHC class I protein complex integral to membrane	immune response antigen processing and presentation of peptide antigen via MHC class I cellular defense response antigen processing and presentation of exogenous protein antigen via MHC class Ib TAP-dependent response to molecule of bacterial origin positive regulation of T cell mediated cytotoxicity cell surface receptor linked signal transduction immune response positive regulation of calcium-mediated signaling cytotoxic T cell differentiation T cell mediated immunity immune response antigen processing and presentation of peptide antigen via MHC class I antigen processing and presentation	protein binding protein homodimerization activity protein binding
1fepA	[pdb]	1.9225 0.00498235	43^ARG 112^SER 197^LYS 260^TYR 316^ARG 337^PHE		cell outer membrane integral to membrane membrane plasma membrane	iron ion binding receptor activity siderophore-iron transmembrane transporter activity transporter activity	iron ion transport ion transport transport siderophore transport
2remB	[pdb]	1.92358 0.00498257	12^TYR 19^ARG 29^GLU 151^LYS 173^PHE 178^ARG		cell redox homeostasis	outer membrane-bounded periplasmic space	protein disulfide oxidoreductase activity
3fehA	[pdb]	1.92363 0.00498258	92^PHE 106^GLU 110^ARG 112^LYS 127^TYR 226^ARG	0.0.0.0	inositol 1,3,4,5 tetrakisphosphate binding protein binding ARF GTPase activator activity metal ion binding zinc ion binding GTPase activator activity	plasma membrane cytoplasm nucleus	regulation of GTPase activity cell surface receptor linked signal transduction regulation of ARF GTPase activity
2qhtA	[pdb]	1.92516 0.00518936	43^ARG 49^ARG 50^LYS 68^PHE 74^GLU 81^TYR	2.3.1.181	cytoplasm	lipoate biosynthetic process protein modification process	transferase activity acyltransferase activity lipoyl(octanoyl) transferase activity catalytic activity
2dpsB	[pdb]	1.92568 0.00518947	77^SER 80^ARG 83^LYS 87^TYR 159^PHE 161^ARG	2.3.2.6	acyltransferase activity leucyltransferase activity transferase activity transferring amino-acyl groups transferase activity	cytoplasm	protein catabolic process
2r9qB	[pdb]	1.92752 0.00518987	210^LYS 262^TYR 267^ARG 268^GLU 290^PHE 291^ARG	0.0.0.0
1bgaC	[pdb]	1.93107 0.00519063	63^GLU 66^ARG 69^LYS 413^ARG 414^PHE 432^TYR	3.2.1.21		cellulose catabolic process metabolic process carbohydrate metabolic process polysaccharide catabolic process	hydrolase activity acting on glycosyl bonds hydrolase activity beta-glucosidase activity cation binding hydrolase activity hydrolyzing O-glycosyl compounds catalytic activity
3ebjB	[pdb]	1.93463 0.00540484	77^GLU 116^ARG 142^LYS 148^PHE 161^TYR 168^ARG			RNA-directed RNA polymerase activity RNA binding	transcription
1smqC	[pdb]	1.93548 0.00540503	47^LYS 307^GLU 309^ARG 337^ARG 342^PHE 348^TYR	1.17.4.1	metal ion binding oxidoreductase activity iron ion binding ribonucleoside-diphosphate reductase activity transition metal ion binding protein binding identical protein binding	nucleus ribonucleoside-diphosphate reductase complex cytoplasm	oxidation reduction DNA replication deoxyribonucleotide biosynthetic process deoxyribonucleoside diphosphate metabolic process
1ni7A	[pdb]	1.9356 0.00540505	34^TYR 42^LYS 83^SER 86^ARG 116^PHE 122^ARG				protein binding
1w63R	[pdb]	1.93635 0.00540522	293^TYR 325^PHE 357^ARG 373^LYS 377^SER 421^ARG	0.0.0.0	Golgi apparatus cytoplasmic vesicle membrane trans-Golgi network clathrin adaptor complex clathrin coat of trans-Golgi network vesicle AP-1 adaptor complex trans-Golgi network cytoplasmic vesicle membrane Golgi apparatus cytoplasmic vesicle membrane coated pit clathrin adaptor complex membrane coat Golgi apparatus cytoplasmic vesicle membrane perinuclear region of cytoplasm trans-Golgi network Golgi apparatus part clathrin adaptor complex membrane coat Golgi apparatus cytoplasmic vesicle membrane clathrin adaptor complex membrane coat	protein binding protein transporter activity protein binding protein binding protein transporter activity binding protein transporter activity protein binding binding	protein transport transport vesicle-mediated transport intracellular protein transport vesicle-mediated transport intracellular protein transport protein transport endocytosis transport protein transport endocytosis transport vesicle-mediated transport intracellular protein transport protein transport endocytosis transport vesicle-mediated transport intracellular protein transport
2d4vB	[pdb]	1.93673 0.0054053	152^PHE 212^ARG 216^TYR 250^GLU 256^ARG 287^LYS	0.0.0.0		isocitrate dehydrogenase (NADP+) activity oxidoreductase activity acting on the CH-OH group of donors NAD or NADP as acceptor magnesium ion binding oxidoreductase activity manganese ion binding metal ion binding NAD or NADH binding	metabolic process tricarboxylic acid cycle glyoxylate cycle oxidation reduction

PDB ID

LRMSD /
p-value

Matching Residues

Gene Ontology annotations

Biological Process

Cellular Component

Molecular Function

1k97A

[pdb]

0.155417
2.43562e-05

106^ARG 139^PHE 202^GLU 286^LYS 288^ARG 331^TYR

6.3.4.5

cellular amino acid biosynthetic process
arginine biosynthetic process

cytoplasm

ligase activity
ATP binding
nucleotide binding
argininosuccinate synthase activity
protein binding

2nz2A

[pdb]

0.398302
9.25892e-05

95^ARG 128^PHE 191^GLU 277^LYS 279^ARG 322^TYR

6.3.4.5

cellular amino acid biosynthetic process
arginine biosynthetic process
urea cycle

cytoplasm

ligase activity
ATP binding
nucleotide binding
argininosuccinate synthase activity
protein binding

1kh1B

[pdb]

0.449406
0.000116814

92^ARG 125^PHE 184^GLU 265^LYS 267^ARG 310^TYR

6.3.4.5

cellular amino acid biosynthetic process
arginine biosynthetic process

cytoplasm

ligase activity
ATP binding
nucleotide binding
argininosuccinate synthase activity

1vl2B

[pdb]

0.589451
0.000178386

93^ARG 126^PHE 189^GLU 275^LYS 277^ARG 320^TYR

6.3.4.5

cellular amino acid biosynthetic process
arginine biosynthetic process

cytoplasm

ligase activity
ATP binding
nucleotide binding
argininosuccinate synthase activity

1kobA

[pdb]

1.13803
0.000243326

26^TYR 69^ARG 79^PHE 134^GLU 138^ARG 186^LYS

0.0.0.0

ATP binding
protein serine/threonine kinase activity
protein kinase activity

protein amino acid phosphorylation

1m41B

[pdb]

1.24463
0.000287839

1174^TYR 1208^GLU 1211^ARG 1220^LYS 1226^ARG 1326^PHE

1.14.14.5

oxidation reduction

oxidoreductase activity
monooxygenase activity
alkanesulfonate monooxygenase activity

2b5wA

[pdb]

1.36488
0.000343455

18^LYS 20^ARG 22^GLU 88^ARG 113^PHE 123^TYR

0.0.0.0

oxidation reduction
metabolic process

oxidoreductase activity
glucose 1-dehydrogenase activity
zinc ion binding
binding
catalytic activity

2zj8A

[pdb]

1.51197
0.000458617

50^SER 199^ARG 202^LYS 316^PHE 317^ARG 374^TYR

DNA repair

hydrolase activity
ATP binding
helicase activity
nucleotide binding
sequence-specific DNA binding
ATP-dependent helicase activity
protein binding
DNA binding
nucleic acid binding
hydrolase activity
acting on acid anhydrides
in phosphorus-containing anhydrides

intracellular

2yy3C

[pdb]

1.5509
0.000543997

4^PHE 11^ARG 36^TYR 54^LYS 60^ARG 86^GLU

eukaryotic translation elongation factor 1 complex

translation
translational elongation

translation elongation factor activity

1jijA

[pdb]

1.57907
0.000625291

135^SER 138^ARG 142^LYS 178^PHE 183^ARG 211^TYR

0.0.0.0

cytoplasm

ligase activity
ATP binding
aminoacyl-tRNA ligase activity
RNA binding
nucleotide binding
tyrosine-tRNA ligase activity

translation
tyrosyl-tRNA aminoacylation
tRNA aminoacylation for protein translation

2yx1A

[pdb]

1.61179
0.000732166

82^LYS 85^ARG 87^GLU 97^TYR 134^PHE 136^ARG

1igoA

[pdb]

1.62275
0.00079735

48^PHE 49^ARG 70^TYR 145^SER 147^ARG 150^LYS

0.0.0.0

hydrolase activity
hydrolase activity
acting on glycosyl bonds
endo-1,4-beta-xylanase activity
hydrolase activity
hydrolyzing O-glycosyl compounds

metabolic process
xylan catabolic process
carbohydrate metabolic process

2nqyB

[pdb]

1.63101
0.000833276

48^PHE 49^ARG 70^TYR 146^SER 148^ARG 151^LYS

0.0.0.0

hydrolase activity
hydrolase activity
acting on glycosyl bonds
endo-1,4-beta-xylanase activity
hydrolase activity
hydrolyzing O-glycosyl compounds

metabolic process
xylan catabolic process
carbohydrate metabolic process

2olsA

[pdb]

1.63646
0.000833484

648^PHE 650^ARG 695^TYR 740^SER 743^ARG 747^LYS

2.7.9.2

metal ion binding
transferase activity
kinase activity
ATP binding
magnesium ion binding
nucleotide binding
pyruvate
water dikinase activity
transferase activity
transferring phosphorus-containing groups
catalytic activity

phosphorylation
gluconeogenesis

3ck8A

[pdb]

1.64436
0.000910696

307^ARG 332^LYS 386^TYR 404^PHE 487^ARG 492^GLU

0.0.0.0

1gl9B

[pdb]

1.65677
0.000951435

781^SER 785^ARG 788^LYS 802^PHE 848^ARG 880^TYR

5.99.1.3

DNA unwinding during replication
DNA topological change
DNA metabolic process

chromosome

metal ion binding
isomerase activity
hydrolase activity
zinc ion binding
ATP binding
helicase activity
DNA topoisomerase activity
DNA binding
nucleotide binding
DNA topoisomerase (ATP-hydrolyzing) activity
ATP-dependent helicase activity
DNA topoisomerase type I activity
nucleic acid binding

2on7D

[pdb]

1.66974
0.00103981

129^ARG 132^PHE 162^GLU 178^TYR 187^LYS 189^ARG

1qh6B

[pdb]

1.67129
0.00103988

48^PHE 49^ARG 70^TYR 146^SER 148^ARG 151^LYS

0.0.0.0

hydrolase activity
hydrolase activity
acting on glycosyl bonds
endo-1,4-beta-xylanase activity
hydrolase activity
hydrolyzing O-glycosyl compounds

metabolic process
xylan catabolic process
carbohydrate metabolic process

1wmiA

[pdb]

1.67346
0.00108771

4^ARG 6^LYS 34^GLU 40^GLU 43^GLU 57^ILE

0.0.0.0

2qm3A

[pdb]

1.67586
0.00108783

233^ARG 235^PHE 244^LYS 247^ARG 323^GLU 331^TYR

0.0.0.0

2b5dX

[pdb]

1.68354
0.00113863

87^LYS 91^ARG 95^GLU 106^TYR 259^ARG 261^PHE

2zgiC

[pdb]

1.70177
0.00130799

112^ARG 124^ARG 126^LYS 133^TYR 146^PHE 177^GLU

0.0.0.0

lyase activity
catalytic activity

metabolic process

1gtmB

[pdb]

1.71069
0.00137074

195^SER 199^ARG 203^LYS 331^PHE 385^TYR 396^ARG

1.4.1.3

cytoplasm

oxidation reduction
metabolic process
cellular amino acid metabolic process

oxidoreductase activity
glutamate dehydrogenase [NAD(P)+] activity
binding
catalytic activity
oxidoreductase activity
acting on the CH-NH2 group of donors
NAD or NADP as acceptor

1f28B

[pdb]

1.71259
0.00137087

43^SER 45^ARG 47^LYS 56^ARG 58^PHE 285^TYR

2.1.1.45

nucleotide biosynthetic process
dTMP biosynthetic process

transferase activity
methyltransferase activity
thymidylate synthase activity

2c5eB

[pdb]

1.7166
0.00143655

22^TYR 41^SER 45^ARG 48^LYS 138^PHE 197^ARG

5.1.3.18

L-ascorbic acid biosynthetic process
cellular metabolic process
metabolic process

NAD or NADH binding
GDP-mannose 3,5-epimerase activity
isomerase activity
nucleotide binding
coenzyme binding
binding
catalytic activity

1u69D

[pdb]

1.71981
0.00143677

22^TYR 54^PHE 55^ARG 77^SER 109^ARG 111^LYS

0.0.0.0

3ffhB

[pdb]

1.74047
0.00164647

290^LYS 291^ARG 298^TYR 304^PHE 340^ARG 357^GLU

2.6.1.9

cellular amino acid biosynthetic process
histidine biosynthetic process
biosynthetic process

transferase activity
transaminase activity
histidinol-phosphate transaminase activity
pyridoxal phosphate binding
transferase activity
transferring nitrogenous groups
catalytic activity

2dckA

[pdb]

1.7459
0.00172289

47^PHE 48^ARG 69^TYR 145^SER 147^ARG 150^LYS

0.0.0.0

hydrolase activity
hydrolase activity
acting on glycosyl bonds
endo-1,4-beta-xylanase activity
carbohydrate binding
hydrolase activity
hydrolyzing O-glycosyl compounds

metabolic process
xylan catabolic process
carbohydrate metabolic process

2on5G

[pdb]

1.74808
0.00172307

129^ARG 132^PHE 162^GLU 175^TYR 187^LYS 189^ARG

3bm3A

[pdb]

1.75142
0.00172334

162^LYS 164^ARG 165^GLU 187^PHE 211^ARG 213^TYR

DNA restriction-modification system

endonuclease activity
Type II site-specific deoxyribonuclease activity
DNA binding

nucleus

1orrA

[pdb]

1.75597
0.00180354

123^SER 127^LYS 191^ARG 196^TYR 199^ARG 201^PHE

5.1.3.10

isomerase activity
CDP-abequose epimerase activity
coenzyme binding
binding
catalytic activity

lipopolysaccharide biosynthetic process
cellular metabolic process
metabolic process

1f5jA

[pdb]

1.76606
0.00188823

46^PHE 47^ARG 66^TYR 142^SER 144^ARG 147^LYS

0.0.0.0

hydrolase activity
acting on glycosyl bonds
hydrolase activity
endo-1,4-beta-xylanase activity
carbohydrate binding
hydrolase activity
hydrolyzing O-glycosyl compounds

xylan catabolic process
metabolic process
carbohydrate metabolic process

1htyA

[pdb]

1.77085
0.00197665

47^GLU 51^ARG 206^PHE 228^ARG 231^TYR 821^LYS

3.2.1.114

Golgi membrane
integral to membrane
membrane
Golgi apparatus
Golgi stack
endoplasmic reticulum

metabolic process
mannose metabolic process
carbohydrate metabolic process

metal ion binding
hydrolase activity
acting on glycosyl bonds
hydrolase activity
zinc ion binding
mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity
cation binding
carbohydrate binding
mannosidase activity
alpha-mannosidase activity
catalytic activity
hydrolase activity
hydrolyzing O-glycosyl compounds

1up7F

[pdb]

1.77368
0.00206924

79^PHE 80^ARG 123^TYR 147^GLU 150^ARG 157^LYS

3.2.1.86

metabolic process
carbohydrate metabolic process

metal ion binding
manganese ion binding
hydrolase activity
acting on glycosyl bonds
hydrolase activity
6-phospho-beta-glucosidase activity
binding
hydrolase activity
hydrolyzing O-glycosyl compounds
catalytic activity

1we5A

[pdb]

1.77381
0.00206925

153^ARG 163^TYR 168^ARG 169^PHE 227^LYS 231^SER

hydrolase activity
acting on glycosyl bonds
hydrolase activity
hydrolase activity
hydrolyzing O-glycosyl compounds
protein binding

metabolic process
carbohydrate metabolic process

2w8bE

[pdb]

1.77395
0.00206927

78^TYR 81^ARG 84^PHE 112^ARG 150^LYS 160^GLU

0.0.0.0

bacteriocin transport
protein transport
transport
protein import

periplasmic space
cell outer membrane
membrane
plasma membrane
integral to membrane

3fqdB

[pdb]

1.79195
0.00226959

245^LYS 260^TYR 271^ARG 277^ARG 285^GLU 290^PHE

5'-3' exoribonuclease activity
hydrolase activity
exonuclease activity
nuclease activity
nucleic acid binding

nucleus
cytosol
nucleus
intracellular

regulation of transcription
regulation of transcription
mRNA processing
rRNA processing
regulation of transcription
DNA-dependent
transcription termination
transcription
chromosome segregation
RNA processing
mRNA processing
rRNA processing
regulation of transcription
DNA-dependent
transcription termination
transcription
nucleobase
nucleoside
nucleotide and nucleic acid metabolic process

2v6eB

[pdb]

1.79228
0.00226962

447^ARG 453^LYS 479^GLU 492^ARG 496^PHE 504^TYR

0.0.0.0

1h70A

[pdb]

1.79423
0.00226983

2^PHE 169^TYR 222^ARG 224^LYS 234^GLU 253^ARG

0.0.0.0

cytoplasm

hydrolase activity
acting on carbon-nitrogen (but not peptide) bonds
in linear amidines

2vlaA

[pdb]

1.80535
0.0024867

115^PHE 136^ARG 140^TYR 157^LYS 218^GLU 224^ARG

0.0.0.0

endonuclease activity

1vpqA

[pdb]

1.80608
0.00248678

189^TYR 191^ARG 226^GLU 230^ARG 232^LYS 238^PHE

0.0.0.0

2gx5C

[pdb]

1.80621
0.0024868

47^LYS 67^GLU 69^ARG 75^TYR 103^ARG 106^PHE

0.0.0.0

GTP binding
DNA binding
nucleotide binding
transcription repressor activity

cytoplasm

regulation of transcription
regulation of transcription
DNA-dependent
transcription
negative regulation of transcription
DNA-dependent

2pk3B

[pdb]

1.80665
0.00248685

67^PHE 108^ARG 130^GLU 227^TYR 282^ARG 284^LYS

0.0.0.0

cellular metabolic process
metabolic process

coenzyme binding
binding
catalytic activity

1gvhA

[pdb]

1.80807
0.00248701

150^GLU 153^ARG 184^ARG 217^TYR 244^LYS 253^PHE

1.14.12.17

cytoplasm

metal ion binding
oxidoreductase activity
iron ion binding
oxygen transporter activity
nitric oxide dioxygenase activity
heme binding
oxygen binding
electron carrier activity

oxidation reduction
oxygen transport
response to toxin
transport

1zavA

[pdb]

1.81067
0.00259902

26^GLU 39^HOH 43^HOH 47^HOH 100^HOH 112^ARG

ribonucleoprotein complex
ribosome
intracellular
ribonucleoprotein complex
ribosome
intracellular

structural constituent of ribosome
structural constituent of ribosome

translation
ribosome biogenesis
translation

2cagA

[pdb]

1.81458
0.00259948

56^LYS 61^PHE 237^ARG 239^SER 299^ARG 304^TYR

1.11.1.6

cytoplasm

metal ion binding
oxidoreductase activity
iron ion binding
peroxidase activity
catalase activity
heme binding

oxidation reduction
hydrogen peroxide catabolic process
response to oxidative stress

2zkrm

[pdb]

1.81861
0.00271701

63^TYR 119^GLY 129^PRO 160^HIS 169^SER 170^ALA

rRNA binding
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
RNA binding
structural constituent of ribosome
transcription regulator activity
structural constituent of ribosome
protein binding
rRNA binding
RNA binding
structural constituent of ribosome
rRNA binding
RNA binding
structural constituent of ribosome
structural constituent of ribosome
protein binding
structural constituent of ribosome
mRNA binding
protein binding
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
RNA binding
structural constituent of ribosome
metal ion binding
rRNA binding
RNA binding
structural constituent of ribosome
structural constituent of ribosome
zinc ion binding
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
5S rRNA binding
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
nucleotide binding
structural constituent of ribosome

ribonucleoprotein complex
ribonucleoprotein complex
ribonucleoprotein complex
intracellular
ribosome
ribonucleoprotein complex
ribonucleoprotein complex
ribonucleoprotein complex
ribonucleoprotein complex
ribosome
cytosolic ribosome
intracellular
ribonucleoprotein complex
ribosome
intracellular
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
intracellular
nucleolus
ribonucleoprotein complex
ribosome
cytosol
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosol
cytosolic large ribosomal subunit
intracellular
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosol
cytosolic large ribosomal subunit
nucleolus
intracellular
ribonucleoprotein complex
ribosome
large ribosomal subunit
intracellular
ribonucleoprotein complex
ribosome
intracellular
cytosolic large ribosomal subunit
ribonucleoprotein complex
ribosome
cytosol
intracellular
ribonucleoprotein complex
ribosome
intracellular
ribonucleoprotein complex
ribosome
intracellular
ribonucleoprotein complex
ribosome
cytosol
large ribosomal subunit
intracellular
ribosome
large ribosomal subunit
intracellular
ribosome
intracellular
ribosome
intracellular
ribosome
intracellular
ribosome
intracellular
ribosome
intracellular
ribonucleoprotein complex
ribosome
intracellular
ribosome
intracellular
ribosome
intracellular
ribosome
intracellular
ribosome
intracellular
ribosome
intracellular
ribosome
intracellular

translation
translation
translation
translation
translation
protein targeting
ribosomal large subunit biogenesis
rRNA processing
translational elongation
translation
translational elongation
translation
translation
translational elongation
translation
translation
translation
translation
translational elongation
translation
translation
translational elongation
translation
translation
translation
translation
translation
translation
translation
ribosome biogenesis
translation
translation
translation
translation
translation
retina development in camera-type eye
G1/S transition checkpoint
retinal ganglion cell axon guidance
optic nerve development
exit from mitosis
translation
ribosomal large subunit assembly
translational elongation

2vkdC

[pdb]

1.82287
0.00271754

156^SER 158^ARG 168^TYR 173^ARG 458^PHE 535^LYS

0.0.0.0

1vdyA

[pdb]

1.823
0.00271755

52^GLU 57^ARG 66^LYS 75^TYR 85^ARG 129^PHE

intracellular protein transport

membrane

protein binding

1wcuA

[pdb]

1.82571
0.00284047

49^SER 65^TYR 77^LYS 101^PHE 116^ARG 132^ARG

0.0.0.0

carbohydrate metabolic process

hydrolase activity
hydrolyzing O-glycosyl compounds

1ot2A

[pdb]

1.8274
0.00284068

21^PHE 24^ARG 103^ARG 106^LYS 112^TYR 142^SER

2.4.1.19

carbohydrate metabolic process

extracellular region

metal ion binding
transferase activity
transferring glycosyl groups
transferase activity
calcium ion binding
cyclomaltodextrin glucanotransferase activity
cation binding
carbohydrate binding
catalytic activity

1vcnA

[pdb]

1.83958
0.0031048

14^TYR 131^GLU 135^ARG 138^LYS 172^ARG 173^PHE

6.3.4.2

glutamine metabolic process
pyrimidine nucleotide biosynthetic process

ligase activity
CTP synthase activity
catalytic activity
nucleotide binding
ATP binding

2apcA

[pdb]

1.83967
0.00310481

266^PHE 303^ARG 393^ARG 397^LYS 418^TYR 445^SER

2.4.1.101

Golgi membrane
integral to membrane
membrane
Golgi apparatus

protein amino acid N-linked glycosylation

transferase activity
transferring glycosyl groups
transferase activity
alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity

1kruA

[pdb]

1.83988
0.00310484

8^ARG 15^PHE 24^GLU 28^ARG 30^LYS 94^TYR

2.3.1.18

cytoplasm

lactose biosynthetic process

transferase activity
acyltransferase activity
galactoside O-acetyltransferase activity

2e40A

[pdb]

1.84206
0.00310515

77^ARG 118^PHE 412^TYR 450^GLU 454^ARG 457^LYS

0.0.0.0

carbohydrate metabolic process

cation binding
hydrolase activity
hydrolyzing O-glycosyl compounds
catalytic activity

2owmD

[pdb]

1.84867
0.00324636

194^PHE 202^ARG 228^TYR 368^ARG 370^SER 377^LYS

0.0.0.0

microtubule
microtubule associated complex

microtubule-based movement

motor activity
ATP binding
nucleotide binding
microtubule motor activity

2ib5E

[pdb]

1.85116
0.00324672

71^LYS 79^TYR 88^PHE 145^GLU 179^ARG 220^ARG

0.0.0.0

protein-chromophore linkage
bioluminescence

1x31D

[pdb]

1.85223
0.00324688

16^GLU 53^PHE 64^ARG 65^LYS 71^ARG 82^TYR

0.0.0.0

cytoplasm

oxidation reduction
tetrahydrofolate metabolic process
tetrahydrofolate metabolic process
metabolic process
glycine catabolic process
tetrahydrofolate metabolic process

oxidoreductase activity
sarcosine oxidase activity
oxidoreductase activity
electron carrier activity
sarcosine oxidase activity
binding
aminomethyltransferase activity
catalytic activity
sarcosine oxidase activity

3d3aA

[pdb]

1.8678
0.00370785

271^LYS 316^PHE 443^ARG 567^GLU 613^ARG 618^TYR

0.0.0.0

beta-galactosidase complex

cell adhesion
carbohydrate metabolic process

hydrolase activity
hydrolyzing O-glycosyl compounds
cation binding
beta-galactosidase activity
catalytic activity

2gagD

[pdb]

1.87605
0.00387502

16^GLU 53^PHE 64^ARG 65^LYS 71^ARG 82^TYR

0.0.0.0

cytoplasm

electron carrier activity
oxidoreductase activity
oxidoreductase activity
sarcosine oxidase activity
sarcosine oxidase activity
binding
aminomethyltransferase activity
catalytic activity
sarcosine oxidase activity

tetrahydrofolate metabolic process
metabolic process
glycine catabolic process
tetrahydrofolate metabolic process
tetrahydrofolate metabolic process

2r4hB

[pdb]

1.87709
0.0038752

17^PHE 23^ARG 24^GLU 30^TYR 33^ARG 61^LYS

0.0.0.0

cell adhesion
cell surface receptor linked signal transduction
protein complex assembly

cell-cell junction
plasma membrane
cell junction
membrane
tight junction

protein binding
ATP binding
nucleotide binding
protein C-terminus binding

1bhgA

[pdb]

1.8794
0.00387559

29^TYR 216^ARG 361^PHE 432^GLU 435^ARG 438^LYS

3.2.1.31

glycosaminoglycan metabolic process
metabolic process
glycosaminoglycan catabolic process
carbohydrate metabolic process

hydrolase activity
acting on glycosyl bonds
hydrolase activity
beta-glucuronidase activity
cation binding
hydrolase activity
hydrolyzing O-glycosyl compounds
catalytic activity

lysosome
microsome

1i84S

[pdb]

1.8806
0.0038758

721^PHE 729^GLU 731^ARG 750^LYS 767^TYR 777^ARG

muscle thick filament assembly
smooth muscle contraction
cardiac muscle fiber development
elastic fiber assembly
striated muscle contraction

myofibril
myosin complex
striated muscle thick filament
cytoplasm
myosin complex
myosin complex
unconventional myosin complex

structural constituent of muscle
ATP binding
calmodulin binding
actin binding
motor activity
nucleotide binding
calcium ion binding
motor activity
motor activity
calcium ion binding
actin-dependent ATPase activity
structural constituent of muscle

2q6tD

[pdb]

1.88183
0.00404509

208^ARG 318^TYR 343^ARG 346^LYS 384^SER 394^PHE

0.0.0.0

DNA replication

helicase activity
ATP binding
DNA helicase activity
DNA binding

2vxhD

[pdb]

1.88178
0.00404508

151^LYS 163^ARG 166^GLU 183^ARG 186^TYR 200^PHE

0.0.0.0

1ndgB

[pdb]

1.88369
0.00404542

338^ARG 340^PHE 347^TYR 364^LYS 366^ARG 383^SER

antigen binding
hydrolase activity
acting on glycosyl bonds
hydrolase activity
catalytic activity
lysozyme activity
antigen binding

defense response to bacterium
cytolysis
metabolic process
cell wall macromolecule catabolic process
positive regulation of B cell activation
positive regulation of immune response
positive regulation of phagocytosis
positive regulation of endocytosis
early endosome to late endosome transport
regulation of proteolysis
immunoglobulin mediated immune response
complement activation
classical pathway
phagocytosis
engulfment
phagocytosis
recognition
humoral immune response mediated by circulating immunoglobulin
positive regulation of type I hypersensitivity
positive regulation of type IIa hypersensitivity
antibody-dependent cellular cytotoxicity
antigen processing and presentation
endosome to lysosome transport

extracellular region
integral to membrane
membrane
plasma membrane
immunoglobulin complex
circulating
multivesicular body

3eh1A

[pdb]

1.88675
0.00404595

1152^LYS 1155^ARG 1156^GLU 1168^TYR 1211^ARG 1213^PHE

perinuclear region of cytoplasm
endoplasmic reticulum membrane
cytoplasm
Golgi membrane
membrane
Golgi apparatus
endoplasmic reticulum
COPII vesicle coat

transporter activity
zinc ion binding
protein binding

vesicle-mediated transport
protein transport
transport
membrane organization
ER to Golgi vesicle-mediated transport
intracellular protein transport

2a52D

[pdb]

1.88701
0.00404599

71^LYS 79^TYR 88^PHE 145^GLU 179^ARG 220^ARG

protein-chromophore linkage
bioluminescence

2nraC

[pdb]

1.89009
0.00421896

16^ARG 37^TYR 50^GLU 53^ARG 136^LYS 155^PHE

DNA replication
DNA replication initiation

DNA-directed DNA polymerase activity

extrachromosomal circular DNA

2j4oA

[pdb]

1.89594
0.00422002

55^LYS 57^ARG 58^SER 104^ARG 110^PHE 179^TYR

activation of MAPKKK activity

cytosol

enzyme activator activity
catalytic activity
protein binding

3cfaH

[pdb]

1.89596
0.00422002

71^LYS 79^TYR 88^PHE 145^GLU 179^ARG 219^ARG

protein-chromophore linkage
bioluminescence

1k5gA

[pdb]

1.89767
0.00439944

29^LEU 35^LYS 94^PRO 127^LEU 129^LEU 155^ALA

perinuclear region of cytoplasm
nuclear pore
chromatin
cytoplasm
melanosome
nucleus
cytosol
nucleoplasm
cytoplasm
nuclear membrane
cytosol
cytoplasm
nucleus
centrosome

positive regulation of transcription
DNA-dependent
androgen receptor signaling pathway
signal transduction
mitosis
mitotic spindle organization
protein export from nucleus
RNA export from nucleus
DNA metabolic process
interspecies interaction between organisms
protein transport
transport
nucleocytoplasmic transport
intracellular protein transport
kinetochore organization
Ran protein signal transduction
chromatin silencing at centromere
chromosome segregation
nucleocytoplasmic transport
chromatin silencing at telomere
signal transduction
intracellular transport
positive regulation of mitotic centrosome separation
spindle organization

protein binding
androgen receptor binding
transcription coactivator activity
GTPase activity
GTP binding
chromatin binding
nucleotide binding
Ran GTPase activator activity
GTPase activator activity
GTPase activator activity
Ran GTPase binding
GDP-dissociation inhibitor activity
protein binding

2eg4B

[pdb]

1.89763
0.00439943

35^LYS 37^ARG 43^GLU 190^TYR 201^PHE 212^ARG

0.0.0.0

sulfate transport

transferase activity
thiosulfate sulfurtransferase activity

3eb7B

[pdb]

1.89762
0.00439943

269^ARG 270^PHE 306^TYR 331^SER 335^ARG 337^LYS

0.0.0.0

receptor binding

sporulation resulting in formation of a cellular spore
pathogenesis
defense response

3cb8A

[pdb]

1.89912
0.00439971

108^PHE 148^ARG 155^TYR 185^GLU 188^ARG 195^LYS

catalytic activity
4 iron
4 sulfur cluster binding
iron-sulfur cluster binding
metal ion binding
oxidoreductase activity
iron ion binding
[formate-C-acetyltransferase]-activating enzyme activity

cytoplasm

oxidation reduction
glucose metabolic process
carbohydrate metabolic process
oxygen and reactive oxygen species metabolic process

2veaA

[pdb]

1.90024
0.00439992

157^TYR 172^ARG 191^LYS 272^SER 308^PHE 310^ARG

2.7.13.3

membrane

protein histidine kinase activity
red or far-red light photoreceptor activity
transferase activity
kinase activity
photoreceptor activity
receptor activity
G-protein coupled photoreceptor activity
ATP binding
signal transducer activity
two-component sensor activity
identical protein binding
protein binding
nucleotide binding

response to red or far red light
protein amino acid autophosphorylation
red
far-red light phototransduction
protein-chromophore linkage
response to stimulus
regulation of transcription
peptidyl-histidine phosphorylation
sensory perception
signal transduction
regulation of transcription
DNA-dependent

3fvyA

[pdb]

1.90168
0.00440019

573^PHE 577^ARG 619^GLU 623^ARG 629^LYS 641^TYR

3.4.14.4

cytoplasm

metal ion binding
hydrolase activity
zinc ion binding
metallopeptidase activity
peptidase activity
aminopeptidase activity
dipeptidyl-peptidase activity

proteolysis

2exhB

[pdb]

1.90226
0.0044003

12^PHE 384^ARG 393^GLU 412^TYR 464^ARG 473^LYS

0.0.0.0

carbohydrate metabolic process

hydrolase activity
hydrolyzing O-glycosyl compounds

1g6iA

[pdb]

1.9043
0.00458652

232^GLU 233^ARG 240^LYS 255^TYR 270^PHE 273^ARG

3.2.1.113

endoplasmic reticulum membrane
integral to membrane
membrane
endoplasmic reticulum

hydrolase activity
acting on glycosyl bonds
hydrolase activity
calcium ion binding
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
protein binding

metabolic process
ER-associated protein catabolic process
protein amino acid N-linked glycosylation

1sazA

[pdb]

1.90444
0.00458655

210^PHE 214^ARG 250^TYR 258^GLU 262^ARG 271^LYS

2.7.2.7

cytoplasm
intracellular

phosphorylation
metabolic process

transferase activity
kinase activity
butyrate kinase activity
phosphotransferase activity
carboxyl group as acceptor
ATP binding
nucleotide binding

1j0kA

[pdb]

1.90474
0.00458661

14^PHE 18^TYR 26^ARG 133^LYS 505^ARG 507^GLU

3.2.1.135

metabolic process
carbohydrate metabolic process

metal ion binding
hydrolase activity
acting on glycosyl bonds
hydrolase activity
calcium ion binding
neopullulanase activity
cation binding
hydrolase activity
hydrolyzing O-glycosyl compounds
catalytic activity

2egiC

[pdb]

1.91177
0.00478063

33^ARG 36^PHE 44^TYR 83^SER 84^ARG 120^LYS

hydrolase activity

2p5iA

[pdb]

1.91609
0.0047815

17^PHE 35^TYR 45^LYS 53^ARG 112^GLU 172^ARG

0.0.0.0

catalytic activity

protein modification process

2bvmA

[pdb]

1.91776
0.00478183

155^GLU 158^ARG 168^TYR 173^ARG 459^PHE 535^LYS

pathogenesis

2ppqA

[pdb]

1.91781
0.00478185

164^LYS 167^ARG 168^GLU 270^ARG 301^TYR 307^PHE

2.7.1.39

nucleotide binding
ATP binding
transferase activity
kinase activity
homoserine kinase activity

threonine biosynthetic process
cellular amino acid biosynthetic process

1s1iE

[pdb]

1.91945
0.00498171

99^ASN 158^ARG 180^ASN 216^THR 218^ASP 224^GLN

cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
large ribosomal subunit
intracellular
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
nucleus
intracellular
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
large ribosomal subunit
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular
cytoplasm
ribonucleoprotein complex
ribosome
cytosolic large ribosomal subunit
intracellular

structural constituent of ribosome
structural constituent of ribosome
protein binding
structural constituent of ribosome
structural constituent of ribosome
transcription regulator activity
protein binding
rRNA binding
RNA binding
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
RNA binding
structural constituent of ribosome
protein binding
rRNA binding
RNA binding
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
protein binding
structural constituent of ribosome
rRNA binding
RNA binding
structural constituent of ribosome
metal ion binding
rRNA binding
zinc ion binding
RNA binding
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome
RNA binding
structural constituent of ribosome
metal ion binding
zinc ion binding
structural constituent of ribosome
structural constituent of ribosome
RNA binding
RNA binding
structural constituent of ribosome
structural constituent of ribosome
RNA binding
rRNA binding
RNA binding
structural constituent of ribosome
5S rRNA binding
structural constituent of ribosome
RNA binding
rRNA binding
structural constituent of ribosome
RNA binding
rRNA binding
RNA binding
structural constituent of ribosome
nucleotide binding
structural constituent of ribosome
RNA binding
structural constituent of ribosome
structural constituent of ribosome
structural constituent of ribosome

translation
translation
ribosomal large subunit assembly
response to cycloheximide
response to antibiotic
translation
translation
response to drug
translation
regulation of translational fidelity
translation
translation
translation
translation
ribosomal large subunit assembly
translation
ribosomal large subunit assembly
translation
translation
ribosome biogenesis
translation
translation
ribosomal large subunit assembly
translation
translation
regulation of translational fidelity
translation
translation
ribosomal large subunit assembly
translation
translation
translation
translation
translation
ribosomal large subunit assembly
response to cycloheximide
response to antibiotic
translation
translational termination
translation
RNA processing
translation
ribosomal large subunit assembly
translation
translation
response to drug
translation
translation

1a05A

[pdb]

1.92023
0.00498188

140^TYR 145^ARG 157^PHE 190^LYS 195^GLU 198^ARG

1.1.1.85

NAD or NADH binding
metal ion binding
oxidoreductase activity
magnesium ion binding
3-isopropylmalate dehydrogenase activity
oxidoreductase activity
acting on the CH-OH group of donors
NAD or NADP as acceptor

cytoplasm

oxidation reduction
leucine biosynthetic process
branched chain family amino acid biosynthetic process
cellular amino acid biosynthetic process
metabolic process

1nezA

[pdb]

1.92091
0.00498202

27^GLU 35^GLY 36^CYS 55^TYR 165^LYS 170^ARG

extracellular region
MHC class I protein complex
membrane
integral to membrane
cell surface
external side of plasma membrane
membrane
MHC class I protein complex
integral to membrane

immune response
antigen processing and presentation of peptide antigen via MHC class I
cellular defense response
antigen processing and presentation of exogenous protein antigen via MHC class Ib
TAP-dependent
response to molecule of bacterial origin
positive regulation of T cell mediated cytotoxicity
cell surface receptor linked signal transduction
immune response
positive regulation of calcium-mediated signaling
cytotoxic T cell differentiation
T cell mediated immunity
immune response
antigen processing and presentation of peptide antigen via MHC class I
antigen processing and presentation