The LabelHash Server
1jg1A motif
Motif residues: GLU97 GLY99 GLY101 ASP160 LEU179 GLY183
Table of Top 100 matches
Click here for a compact table with the top 100 matches.The images below show the motif residues and the match residues superimposed. The carbon atoms are white in the motif and green in the match. Other atoms in the motif and match are colored by element. The C-alphas are shown as spheres, while the remaining motif and match atoms are shown in stick representation. The rest of the matching protein is shown in ribbon representation.
Downloads
- A zip file with PDB files for the top 100 matches and the motif itself.
- An XML file with all matches. You can open this file in Chimera with our ViewMatch plugin.
Top 20 matches
For each match you can click on the "[pdb]" link to download a PDB file with the matching chain aligned with the motif.1. 1jg2A [pdb]
LRMSD: 0.0375225879252p-value: 2.01663806365e-05
Matching residues: GLU97 GLY99 GLY101 ASP160 LEU179 GLY183
EC class: 2.1.1.77
GO terms:
Molecular function: transferase activity, methyltransferase activity, protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Biological process: protein modification process, protein repair
Cellular component: cytoplasm
2. 2yxeB [pdb]
LRMSD: 0.194319009781p-value: 7.0544963819e-05
Matching residues: GLU83 GLY85 GLY87 ASP148 LEU167 GLY171
EC class: 2.1.1.77
GO terms:
Molecular function: transferase activity, methyltransferase activity, protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Biological process: protein repair, protein modification process
Cellular component: cytoplasm
3. 1vbfC [pdb]
LRMSD: 0.288207471371p-value: 0.000155849556904
Matching residues: GLU76 GLY78 GLY80 ASP136 LEU155 GLY159
EC class: 0.0.0.0
GO terms:
Molecular function: methyltransferase activity, transferase activity, protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Biological process: protein modification process
4. 3evzA [pdb]
LRMSD: 0.305032283068p-value: 0.0001760670566
Matching residues: GLU86 GLY88 GLY90 ASP150 LEU194 GLY198
EC class: 0.0.0.0
GO terms:
Molecular function: methyltransferase activity
5. 1r18A [pdb]
LRMSD: 0.322430163622p-value: 0.000198360779905
Matching residues: ASP84 GLY86 GLY88 ASN159 LEU178 GLY182
EC class: 2.1.1.77
GO terms:
Molecular function: transferase activity, methyltransferase activity, protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Biological process: protein modification process
Cellular component: cytoplasm
6. 1o54A [pdb]
LRMSD: 0.325321733952p-value: 0.000210205282201
Matching residues: ASP106 GLY108 GLY110 ASP171 LEU191 GLY195
EC class: 0.0.0.0
GO terms:
Molecular function: tRNA (adenine-N1-)-methyltransferase activity
Biological process: tRNA methylation
Cellular component: nucleus
7. 1dl5B [pdb]
LRMSD: 0.400939017534p-value: 0.000361006677849
Matching residues: GLU81 GLY83 GLY85 ASP146 LEU165 GLY169
EC class: 2.1.1.77
GO terms:
Molecular function: transferase activity, methyltransferase activity, protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Biological process: protein modification process, protein repair
Cellular component: cytoplasm
8. 3e23A [pdb]
LRMSD: 0.400981217623p-value: 0.000361007550964
Matching residues: GLU49 GLY51 GLY53 ASP104 LEU131 GLY135
EC class: 0.0.0.0
GO terms:
9. 1i1nA [pdb]
LRMSD: 0.415929615498p-value: 0.000402891135309
Matching residues: ASP83 GLY85 GLY87 ASP153 LEU172 GLY176
EC class: 2.1.1.77
GO terms:
Molecular function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, transferase activity, methyltransferase activity, identical protein binding, protein binding
Biological process: protein repair, protein amino acid methylation, protein modification process
Cellular component: cytoplasm, cellular_component, endoplasmic reticulum
10. 3bgvA [pdb]
LRMSD: 0.442083597183p-value: 0.000507470627781
Matching residues: ASP39 GLY41 GLY43 ASP115 LEU144 GLY148
EC class: 2.1.1.56
GO terms:
Molecular function: mRNA (guanine-N7-)-methyltransferase activity, RNA binding, transferase activity, methyltransferase activity
Biological process: mRNA capping, mRNA processing
Cellular component: nucleus, nucleoplasm
11. 1i9gA [pdb]
LRMSD: 0.453106284142p-value: 0.000572107906919
Matching residues: GLU105 GLY107 GLY109 ASP173 LEU193 GLY197
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, methyltransferase activity, tRNA (adenine-N1-)-methyltransferase activity
Biological process: tRNA methylation
Cellular component: nucleus
12. 3busA [pdb]
LRMSD: 0.454157054424p-value: 0.000572144286707
Matching residues: ASP67 GLY69 GLY71 ASP131 LEU156 GLY160
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, methyltransferase activity, transferase activity, methyltransferase activity
Biological process: metabolic process, metabolic process
13. 1zx0B [pdb]
LRMSD: 0.483981013298p-value: 0.000720802228898
Matching residues: GLU66 GLY68 GLY70 ASP130 LEU160 GLY164
EC class: 2.1.1.2
GO terms:
Molecular function: transferase activity, methyltransferase activity, guanidinoacetate N-methyltransferase activity
Biological process: spermatogenesis, organ morphogenesis, regulation of multicellular organism growth, creatine metabolic process, muscle contraction, creatine biosynthetic process
Cellular component: cytosol
14. 2pbfA [pdb]
LRMSD: 0.485098302364p-value: 0.000720849609934
Matching residues: ASP86 GLY88 GLY90 ASP164 LEU183 GLY187
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, methyltransferase activity, protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Biological process: protein modification process
15. 3g5lA [pdb]
LRMSD: 0.488698542118p-value: 0.000763108371757
Matching residues: ASP48 GLY50 GLY52 ASN108 LEU133 GLY137
EC class: 0.0.0.0
GO terms:
Molecular function: methyltransferase activity
Biological process: metabolic process
16. 2vdvF [pdb]
LRMSD: 0.490381121635p-value: 0.000763183168601
Matching residues: ASP101 GLY103 GLY105 SER176 LEU209 GLY213
EC class: 2.1.1.33
GO terms:
Molecular function: transferase activity, methyltransferase activity, tRNA (guanine-N7-)-methyltransferase activity, protein binding, tRNA binding, RNA binding
Biological process: tRNA processing, ribosome biogenesis, tRNA methylation, tRNA modification
Cellular component: nucleus
17. 3dtnB [pdb]
LRMSD: 0.490699589252p-value: 0.000763197371271
Matching residues: ASP48 GLY50 GLY52 ASP109 LEU136 GLY140
EC class: 0.0.0.0
GO terms:
18. 1ufkA [pdb]
LRMSD: 0.503535509109p-value: 0.000854097597767
Matching residues: ASP126 GLY128 GLY130 ASP186 LEU208 GLY212
EC class: GO terms:
Molecular function: transferase activity, methyltransferase activity, protein methyltransferase activity
Biological process: protein amino acid methylation
Cellular component: cytoplasm
19. 3bkwA [pdb]
LRMSD: 0.504564762115p-value: 0.000854147365317
Matching residues: ASP48 GLY50 GLY52 ASP108 LEU133 GLY137
EC class: 0.0.0.0
GO terms:
Molecular function: methyltransferase activity
Biological process: metabolic process
20. 3e05D [pdb]
LRMSD: 0.506869494915p-value: 0.000854258891195
Matching residues: ASP254 GLY256 GLY258 ASP318 LEU340 GLY344
EC class: 0.0.0.0
GO terms:
Molecular function: transferase activity, methyltransferase activity, precorrin-6Y C5,15-methyltransferase (decarboxylating) activity, protein methyltransferase activity
Biological process: cobalamin biosynthetic process, metabolic process
