| PDB ID |
LRMSD / p-value |
Matching Residues |
EC |
Gene Ontology annotations |
| Biological Process |
Cellular Component |
Molecular Function |
| 1czfA |
[pdb] |
0 2.47974e-05 | 178ASN 180ASP 201ASP 256ARG 258LYS 291TYR |
3.2.1.15
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- polygalacturonase activity
|
- metabolic process
- cell wall organization
- carbohydrate metabolic process
|
| 2iq7C |
[pdb] |
0.255393 0.000100461 | 176ASN 178ASP 199ASP 254ARG 256LYS 289TYR |
0.0.0.0
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- polygalacturonase activity
|
- metabolic process
- cell wall organization
- carbohydrate metabolic process
|
| 1nhcF |
[pdb] |
0.273977 0.000106636 | 184ASN 186ASP 207ASP 262ARG 264LYS 297TYR |
3.2.1.15
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- polygalacturonase activity
|
- metabolic process
- cell wall organization
- carbohydrate metabolic process
|
| 1hg8A |
[pdb] |
0.488638 0.00019915 | 189ASN 191ASP 212ASP 267ARG 269LYS 302TYR |
3.2.1.15
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- polygalacturonase activity
|
- metabolic process
- cell wall organization
- carbohydrate metabolic process
|
| 1ib4B |
[pdb] |
0.538464 0.000219561 | 157ASN 159ASP 180ASP 235ARG 237LYS 270TYR |
3.2.1.15
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- polygalacturonase activity
|
- metabolic process
- cell wall organization
- carbohydrate metabolic process
|
| 1kcdA |
[pdb] |
0.681293 0.000278992 | 151ASN 153ASP 173ASP 226ARG 228LYS 262TYR |
0.0.0.0
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- polygalacturonase activity
|
- metabolic process
- cell wall organization
- carbohydrate metabolic process
|
| 1bheA |
[pdb] |
1.02332 0.000342173 | 200ASN 202ASP 223ASP 280ARG 282LYS 314TYR |
3.2.1.15
|
|
- hydrolase activity
- hydrolase activity
- acting on glycosyl bonds
- polygalacturonase activity
|
- metabolic process
- cell wall organization
- carbohydrate metabolic process
|
| 1xbfB |
[pdb] |
1.37068 0.000425148 | 7TYR 13ASN 14ASP 15ASP 44HIS 126LYS |
0.0.0.0
|
|
|
|
| 1vmhA |
[pdb] |
1.4371 0.000471687 | 7TYR 13ASN 14ASP 15ASP 44HIS 126LYS |
0.0.0.0
|
|
|
|
| 2uvfB |
[pdb] |
1.49938 0.000553498 | 379ASN 381ASP 402ASP 466ARG 468LYS 501TYR |
0.0.0.0
|
|
- carbohydrate metabolic process
|
- polygalacturonase activity
|
| 1d5rA |
[pdb] |
1.5322 0.000602257 | 49ASN 51ASP 52ASP 61HIS 66LYS 68TYR |
3.1.3.48, 3.1.3.67, 3.1.3.16
|
- apoptosis
- endothelial cell migration
- neuron projection development
- angiogenesis
- regulation of cyclin-dependent protein kinase activity
- negative regulation of cell cycle
- cell cycle
- negative regulation of protein kinase B signaling cascade
- negative regulation of focal adhesion formation
- phosphoinositide dephosphorylation
- inositol phosphate dephosphorylation
- regulation of protein stability
- negative regulation of cell migration
- negative regulation of cell proliferation
- protein amino acid dephosphorylation
- cardiac muscle tissue development
- platelet-derived growth factor receptor signaling pathway
- negative regulation of apoptosis
- cell migration
- central nervous system development
- induction of apoptosis
- heart development
- cell proliferation
- lipid metabolic process
|
- cytosol
- nucleus
- cytoplasm
|
- protein tyrosine/serine/threonine phosphatase activity
- phosphatidylinositol-3-phosphatase activity
- protein serine/threonine phosphatase activity
- phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity
- phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity
- PDZ domain binding
- magnesium ion binding
- protein binding
- platelet-derived growth factor receptor binding
- inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity
- protein tyrosine phosphatase activity
- hydrolase activity
- lipid binding
- phosphoprotein phosphatase activity
|
| 2gafD |
[pdb] |
1.56436 0.000662204 | 233LYS 240TYR 245ASP 248ASP 249ASN 467HIS |
2.7.7.19
|
|
- mRNA processing
- mRNA capping
- transcription
- regulation of mRNA 3'-end processing
- viral transcription
- mRNA processing
- transcription
|
- transferase activity
- methyltransferase activity
- mRNA (nucleoside-2'-O-)-methyltransferase activity
- transferase activity
- polynucleotide adenylyltransferase activity
- nucleotide binding
- ATP binding
|
| 4ptdA |
[pdb] |
1.58164 0.000714317 | 116LYS 118TYR 163ARG 180ASP 181ASN 198ASP |
4.6.1.13
|
|
- lipid catabolic process
- intracellular signaling cascade
- lipid metabolic process
|
- lyase activity
- phosphatidylinositol diacylglycerol-lyase activity
- phosphoric diester hydrolase activity
- phospholipase C activity
|
| 1kaeB |
[pdb] |
1.63244 0.000866667 | 38ASP 41ASP 42ASN 130TYR 218LYS 219ARG |
1.1.1.23
|
|
- metal ion binding
- oxidoreductase activity
- zinc ion binding
- histidinol dehydrogenase activity
- NAD or NADH binding
|
- oxidation reduction
- cellular amino acid biosynthetic process
- histidine biosynthetic process
- metabolic process
|
| 1ouuD |
[pdb] |
1.64029 0.000892241 | 85TYR 86LYS 99ASP 101ASP 102ASN 144ARG |
|
- hemoglobin complex
- hemoglobin complex
|
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
|
- oxygen transport
- transport
- oxygen transport
- transport
|
| 1nikA |
[pdb] |
1.65073 0.000918491 | 368GLU 399ASP 438ASP 439ASN 440ASP 465ASN |
2.7.7.6
|
- DNA-directed RNA polymerase III complex
- nucleus
- DNA-directed RNA polymerase I complex
- DNA-directed RNA polymerase III complex
- DNA-directed RNA polymerase II
- core complex
- nucleoplasm
- nucleus
- mitochondrion
- DNA-directed RNA polymerase II
- core complex
- nucleolus
- nucleolus
- nucleus
- DNA-directed RNA polymerase I complex
- DNA-directed RNA polymerase II
- core complex
- nucleoplasm
- nucleus
- DNA-directed RNA polymerase II
- core complex
- nucleoplasm
- nucleus
- DNA-directed RNA polymerase II
- core complex
- nucleus
- DNA-directed RNA polymerase I complex
- DNA-directed RNA polymerase III complex
- DNA-directed RNA polymerase II
- core complex
- nucleoplasm
- cytoplasm
- nucleus
- DNA-directed RNA polymerase I complex
- DNA-directed RNA polymerase III complex
- DNA-directed RNA polymerase II
- core complex
- nucleoplasm
- RNA polymerase complex
- nucleus
- mitochondrion
- DNA-directed RNA polymerase II
- core complex
- nucleus
- DNA-directed RNA polymerase II
- core complex
- nucleus
- DNA-directed RNA polymerase I complex
- DNA-directed RNA polymerase III complex
- DNA-directed RNA polymerase II
- core complex
- nucleoplasm
|
- ribonucleoside binding
- metal ion binding
- zinc ion binding
- DNA-directed RNA polymerase activity
- DNA binding
- metal ion binding
- nucleotidyltransferase activity
- transferase activity
- zinc ion binding
- DNA-directed RNA polymerase activity
- DNA binding
- magnesium ion binding
- protein binding
- protein binding
- protein binding
- protein binding
- protein binding
- metal ion binding
- zinc ion binding
- DNA-directed RNA polymerase activity
- DNA binding
- protein binding
- metal ion binding
- zinc ion binding
- DNA-directed RNA polymerase activity
- protein dimerization activity
- DNA binding
- metal ion binding
- zinc ion binding
- DNA-directed RNA polymerase activity
- transcription regulator activity
- DNA binding
- nucleic acid binding
- protein binding
- DNA-directed RNA polymerase activity
- DNA binding
- protein binding
- DNA-directed RNA polymerase activity
- DNA binding
- metal ion binding
- nucleotidyltransferase activity
- transferase activity
- zinc ion binding
- DNA-directed RNA polymerase activity
- magnesium ion binding
- DNA binding
- DNA-directed RNA polymerase activity
- protein dimerization activity
- DNA binding
- DNA-directed RNA polymerase activity
- protein binding
|
- transcription from RNA polymerase II promoter
- transcription
- transcription
- transcription from RNA polymerase II promoter
- RNA elongation from RNA polymerase II promoter
- transcription
- transcription from RNA polymerase II promoter
- regulation of transcription
- transcription
- transcription from RNA polymerase II promoter
- response to DNA damage stimulus
- transcription
- DNA repair
- response to drug
- transcription from RNA polymerase II promoter
- transcription-coupled nucleotide-excision repair
- regulation of transcription
- transcription
- transcription from RNA polymerase II promoter
- transcription
- transcription from RNA polymerase II promoter
- transcription
- DNA-dependent
- transcription
- transcription from RNA polymerase II promoter
- transcription
- transcription from RNA polymerase II promoter
- transcription
- transcription from RNA polymerase II promoter
|
| 2oxaA |
[pdb] |
1.66093 0.000945963 | 79ASP 145ASN 148ASP 179ARG 212TYR 214LYS |
0.0.0.0
|
|
- peptidase activity
- serine-type endopeptidase activity
- serine-type peptidase activity
- hydrolase activity
|
|
| 1cm8A |
[pdb] |
1.66693 0.000974586 | 135TYR 139LYS 142ARG 153ASP 158ASN 171ASP |
2.7.11.24
|
- cell cycle arrest
- myoblast differentiation
- cell cycle
- Ras protein signal transduction
- intracellular signaling cascade
- muscle organ development
- signal transduction
- DNA damage induced protein phosphorylation
- protein amino acid phosphorylation
|
- magnesium ion binding
- protein binding
- protein serine/threonine kinase activity
- metal ion binding
- transferase activity
- kinase activity
- ATP binding
- nucleotide binding
- MAP kinase activity
- protein kinase activity
|
|
| 2j63B |
[pdb] |
1.69786 0.00110293 | 169LYS 200TYR 204ARG 335ASP 337ASN 411ASP |
0.0.0.0
|
|
|
- lyase activity
- endonuclease activity
- DNA-(apurinic or apyrimidinic site) lyase activity
- nuclease activity
- DNA binding
|
| 1lp4A |
[pdb] |
1.7247 0.0012527 | 138TYR 142LYS 148HIS 156ASP 161ASN 175ASP |
2.7.11.1
|
|
- protein amino acid phosphorylation
|
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- protein kinase activity
|
| 2dgaA |
[pdb] |
1.72535 0.00125273 | 266TYR 340LYS 341HIS 353ASN 355ASP 356ASP |
0.0.0.0
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- beta-glucosidase activity
- cation binding
- hydrolase activity
- hydrolyzing O-glycosyl compounds
- catalytic activity
|
- metabolic process
- carbohydrate metabolic process
|
| 1bxcD |
[pdb] |
1.72624 0.00125276 | 2TYR 5LYS 48HIS 244ASP 246ASN 286ASP |
5.3.1.5
|
- D-xylose metabolic process
- pentose-phosphate shunt
- carbohydrate metabolic process
|
|
- metal ion binding
- isomerase activity
- magnesium ion binding
- xylose isomerase activity
|
| 1q7fB |
[pdb] |
1.7286 0.00125286 | 766TYR 769LYS 792ASN 793ASP 808ASP 1023ARG |
|
- cytoplasm
- intracellular
- basal cortex
- apical cortex
|
- protein binding
- translation repressor activity
- metal ion binding
- zinc ion binding
- translation regulator activity
|
- rRNA transcription
- regulation of translation
- oogenesis
- segmentation
- asymmetric cell division
- negative regulation of cell proliferation
- brain development
- negative regulation of neuroblast proliferation
- neuroblast proliferation
- ganglion mother cell fate determination
- phagocytosis
- engulfment
|
| 2zo9C |
[pdb] |
1.72947 0.00129308 | 12ARG 17LYS 19TYR 50ASP 80ASN 82ASP |
0.0.0.0
|
|
|
|
| 2rkpA |
[pdb] |
1.73102 0.00129315 | 138TYR 142LYS 148HIS 156ASP 161ASN 175ASP |
2.7.11.1
|
- Wnt receptor signaling pathway
- signal transduction
- protein amino acid phosphorylation
|
|
- protein serine/threonine kinase activity
- protein N-terminus binding
- transferase activity
- kinase activity
- ATP binding
- nucleotide binding
- protein kinase activity
- protein binding
|
| 1hgxA |
[pdb] |
1.76681 0.00152195 | 16ASN 18ASP 19ASP 25ARG 53TYR 58LYS |
|
|
- metal ion binding
- transferase activity
- transferring glycosyl groups
- transferase activity
- magnesium ion binding
- hypoxanthine phosphoribosyltransferase activity
|
- purine ribonucleoside salvage
- nucleoside metabolic process
|
| 2icrA |
[pdb] |
1.76793 0.00152201 | 6HIS 10ASP 11ASP 36ASN 82TYR 84LYS |
0.0.0.0
|
|
|
- protein-chromophore linkage
- bioluminescence
|
| 1z57A |
[pdb] |
1.77836 0.00157355 | 270TYR 274LYS 280HIS 288ASP 293ASN 325ASP |
2.7.12.1
|
- cell proliferation
- protein amino acid phosphorylation
|
|
- transferase activity
- kinase activity
- ATP binding
- protein tyrosine kinase activity
- protein serine/threonine kinase activity
- nucleotide binding
- non-membrane spanning protein tyrosine kinase activity
- protein kinase activity
|
| 2e6kB |
[pdb] |
1.78059 0.00157367 | 52ASN 55ASP 57ASP 76TYR 100LYS 109HIS |
0.0.0.0
|
|
|
- transferase activity
- transketolase activity
- catalytic activity
|
| 1bbjH |
[pdb] |
1.80693 0.00179209 | 35HIS 55ASN 56ASP 57ASP 97LYS 101TYR |
|
|
|
- membrane fraction
- extracellular region
|
| 3f8uC |
[pdb] |
1.81909 0.00185194 | 250LEU 251ALA 253ILE 265GLU 305GLY 309GLU |
5.3.4.1
|
- microsome
- Golgi membrane
- endoplasmic reticulum membrane
- MHC class I peptide loading complex
- integral to membrane
- membrane
- endoplasmic reticulum
- endoplasmic reticulum
- melanosome
- endoplasmic reticulum lumen
|
- protein binding
- MHC class I protein binding
- TAP2 binding
- TAP1 binding
- peptide antigen binding
- unfolded protein binding
- peptide antigen-transporting ATPase activity
- isomerase activity
- protein disulfide isomerase activity
- phospholipase C activity
- cysteine-type endopeptidase activity
- protein binding
|
- retrograde vesicle-mediated transport
- Golgi to ER
- peptide antigen stabilization
- immune response
- protein complex assembly
- antigen processing and presentation of endogenous peptide antigen via MHC class I
- signal transduction
- protein retention in ER lumen
- protein import into nucleus
- cell redox homeostasis
- positive regulation of apoptosis
|
| 1pvwB |
[pdb] |
1.82668 0.00197702 | 20TYR 189ASP 190ASP 192ASN 200LYS 201ARG |
4.1.99.12
|
|
- metal ion binding
- manganese ion binding
- lyase activity
- magnesium ion binding
- 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
|
- riboflavin biosynthetic process
|
| 1olpA |
[pdb] |
1.83256 0.00197741 | 67ASP 77ASN 92ASP 99ARG 190LYS 195TYR |
0.0.0.0
|
|
|
- phospholipase C activity
- hydrolase activity
- acting on ester bonds
- zinc ion binding
|
| 3ebyA |
[pdb] |
1.8325 0.00197741 | 16ASP 17ASP 19ASN 44TYR 132ARG 143LYS |
0.0.0.0
|
|
- cellular aromatic compound metabolic process
- oxidation reduction
|
- oxidoreductase activity
- acting on single donors with incorporation of molecular oxygen
- incorporation of two atoms of oxygen
- catalytic activity
|
| 3e3bX |
[pdb] |
1.83749 0.00204332 | 139TYR 143LYS 149HIS 157ASP 162ASN 176ASP |
2.7.11.1
|
|
- Wnt receptor signaling pathway
- protein amino acid phosphorylation
- regulation of cell cycle
|
- protein N-terminus binding
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- protein kinase activity
- protein binding
|
| 2a1aB |
[pdb] |
1.84489 0.00211166 | 300TYR 304LYS 307ARG 414ASP 419ASN 432ASP |
2.7.11.1
|
- interspecies interaction between organisms
- response to virus
- negative regulation of cell proliferation
- protein amino acid phosphorylation
- protein amino acid autophosphorylation
- endoplasmic reticulum unfolded protein response
- translation
- translation
- translational initiation
- virus-infected cell apoptosis
|
- intracellular
- ribosome
- cytoplasm
- multi-eIF complex
- eukaryotic translation initiation factor 2 complex
|
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- RNA binding
- nucleotide binding
- protein phosphatase type 2A regulator activity
- eukaryotic translation initiation factor 2alpha kinase activity
- protein kinase activity
- protein binding
- translation initiation factor activity
- RNA binding
- double-stranded RNA binding
|
| 2qg7E |
[pdb] |
1.84789 0.00211187 | 207LYS 210HIS 296ASP 363ASP 366ASN 394TYR |
0.0.0.0
|
|
|
|
| 3fi8A |
[pdb] |
1.85017 0.00218216 | 211LYS 213HIS 288ASP 317ASP 320ASN 357TYR |
0.0.0.0
|
|
|
|
| 1dghD |
[pdb] |
1.85669 0.00225393 | 144ASP 218HIS 231TYR 233LYS 335ASP 338ASN |
1.11.1.6
|
- heme binding
- catalase activity
- protein homodimerization activity
- NADP or NADPH binding
- oxidoreductase activity
- acting on peroxide as acceptor
- metal ion binding
- oxidoreductase activity
- growth factor activity
- iron ion binding
- peroxidase activity
- aminoacylase activity
|
- hydrogen peroxide catabolic process
- UV protection
- protein tetramerization
- negative regulation of apoptosis
- response to reactive oxygen species
- oxidation reduction
- cell proliferation
- response to oxidative stress
- positive regulation of NF-kappaB transcription factor activity
- negative regulation of NF-kappaB transcription factor activity
- hemoglobin metabolic process
- positive regulation of phosphoinositide 3-kinase cascade
- aerobic respiration
- cholesterol metabolic process
- triglyceride metabolic process
|
- peroxisome
- peroxisomal membrane
- mitochondrion
|
| 1th4D |
[pdb] |
1.85667 0.00225393 | 143ASP 217HIS 230TYR 232LYS 334ASP 337ASN |
1.11.1.6
|
- metal ion binding
- oxidoreductase activity
- growth factor activity
- iron ion binding
- peroxidase activity
- catalase activity
- heme binding
- aminoacylase activity
- oxidoreductase activity
- acting on peroxide as acceptor
|
- oxidation reduction
- hydrogen peroxide catabolic process
- cell proliferation
- response to oxidative stress
- triglyceride metabolic process
- cholesterol metabolic process
- aerobic respiration
- positive regulation of phosphoinositide 3-kinase cascade
- hemoglobin metabolic process
- negative regulation of NF-kappaB transcription factor activity
- positive regulation of NF-kappaB transcription factor activity
|
- peroxisome
- mitochondrion
- peroxisomal membrane
|
| 2qkwB |
[pdb] |
1.87169 0.00240246 | 54LYS 56TYR 71ARG 164ASP 169ASN 182ASP |
0.0.0.0
|
|
- nucleotide binding
- kinase activity
- protein serine/threonine kinase activity
- ATP binding
- protein kinase activity
|
- protein amino acid phosphorylation
|
| 3c5iA |
[pdb] |
1.87447 0.00240268 | 141LYS 143HIS 218ASP 247ASP 250ASN 287TYR |
0.0.0.0
|
|
|
|
| 1e5mA |
[pdb] |
1.87904 0.00240304 | 227ASP 320ARG 323LYS 331TYR 374ASN 376ASP |
2.3.1.179
|
|
- lipid biosynthetic process
- fatty acid biosynthetic process
- biosynthetic process
- metabolic process
|
- transferase activity
- acyltransferase activity
- beta-ketoacyl-acyl-carrier-protein synthase II activity
- transferase activity
- transferring acyl groups other than amino-acyl groups
- catalytic activity
|
| 1x56A |
[pdb] |
1.88565 0.00248097 | 337ASP 339ASN 340ASP 368TYR 370LYS 374ARG |
6.1.1.22
|
|
- ligase activity
- ATP binding
- aminoacyl-tRNA ligase activity
- nucleotide binding
- asparagine-tRNA ligase activity
- aspartate-tRNA ligase activity
- nucleic acid binding
|
- translation
- aspartyl-tRNA aminoacylation
- asparaginyl-tRNA aminoacylation
- tRNA aminoacylation for protein translation
|
| 1zrzA |
[pdb] |
1.88883 0.00256118 | 253ARG 256TYR 258LYS 330ASP 373ASP 374ASN |
2.7.11.13
|
- cytosol
- polarisome
- nucleus
- membrane
- endosome
- cytoplasm
- apical part of cell
- apical plasma membrane
|
- membrane organization
- cytoskeleton organization
- vesicle-mediated transport
- establishment or maintenance of epithelial cell apical/basal polarity
- protein targeting to membrane
- secretion
- cell-cell junction organization
- signal transduction
- protein amino acid phosphorylation
- intracellular signaling cascade
- eye photoreceptor cell development
- establishment of apical/basal cell polarity
- actin filament organization
- Golgi vesicle budding
- cellular response to insulin stimulus
- positive regulation of glucose import
- regulation of establishment of protein localization
|
- protein binding
- phospholipid binding
- ATP binding
- transferase activity
- kinase activity
- zinc ion binding
- protein serine/threonine kinase activity
- nucleotide binding
- metal ion binding
- diacylglycerol binding
- protein kinase C activity
- protein kinase activity
|
| 1qnzH |
[pdb] |
1.89074 0.00256134 | 152ASN 172TYR 179LYS 197ARG 201ASP 202ASP |
|
|
- antigen binding
- antigen binding
|
|
| 3e93A |
[pdb] |
1.89625 0.00264438 | 132TYR 139LYS 142HIS 150ASP 155ASN 168ASP |
2.7.11.24
|
- MP kinase activity
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- MAP kinase activity
- MAP kinase kinase activity
- protein kinase activity
- protein binding
|
- cytoplasm
- nucleus
- cytosol
- nucleoplasm
- spindle pole
- cell
|
- response to stress
- protein kinase cascade
- Ras protein signal transduction
- intracellular signaling cascade
- chemotaxis
- cell surface receptor linked signal transduction
- signal transduction
- cell motion
- protein amino acid phosphorylation
- DNA damage checkpoint
- angiogenesis
- chondrocyte differentiation
- glucose metabolic process
- skeletal muscle tissue development
- fatty acid oxidation
- lipopolysaccharide-mediated signaling pathway
- response to muramyl dipeptide
- response to lipopolysaccharide
- positive regulation of erythrocyte differentiation
- positive regulation of transcription from RNA polymerase II promoter
|
| 2ixbA |
[pdb] |
1.89785 0.00264452 | 150ASN 355TYR 361LYS 363HIS 376ASP 380ASP |
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- alpha-N-acetylgalactosaminidase activity
- oxidoreductase activity
- binding
- catalytic activity
|
|
| 2odjB |
[pdb] |
1.8979 0.00264452 | 271TYR 273LYS 275HIS 364ASP 398ASN 400ASP |
|
- basic amino acid transport
- ion transport
- transport
|
- integral to cell outer membrane
- cell outer membrane
- integral to membrane
- membrane
- plasma membrane
|
- porin activity
- serine-type peptidase activity
- hydrolase activity
- peptidase activity
|
| 2eklA |
[pdb] |
1.90018 0.00264472 | 47TYR 70LYS 80ASP 81ASN 83ASP 90ARG |
0.0.0.0
|
|
- NAD or NADH binding
- cofactor binding
- oxidoreductase activity
- acting on the CH-OH group of donors
- NAD or NADP as acceptor
- binding
- phosphoglycerate dehydrogenase activity
- catalytic activity
|
- metabolic process
- L-serine biosynthetic process
- oxidation reduction
|
| 2oqhD |
[pdb] |
1.90185 0.00273016 | 91TYR 197ASP 199ASN 224ASP 273LYS 297HIS |
0.0.0.0
|
|
- isomerase activity
- catalytic activity
|
|
| 1i2dB |
[pdb] |
1.90522 0.00273046 | 200ASN 234ASP 236ASP 378TYR 383LYS 386ARG |
2.7.7.4
|
- cysteine biosynthetic process
- methionine biosynthetic process
- cellular amino acid biosynthetic process
- sulfate assimilation
|
|
- nucleotidyltransferase activity
- transferase activity
- ATP binding
- catalytic activity
- nucleotide binding
- sulfate adenylyltransferase (ATP) activity
- transferase activity
- transferring phosphorus-containing groups
- kinase activity
|
| 1lf9A |
[pdb] |
1.91264 0.00281925 | 182LYS 187TYR 227ARG 331ASP 332ASP 333ASN |
0.0.0.0
|
|
- hydrolase activity
- acting on glycosyl bonds
- hydrolase activity
- glucan 1,4-alpha-glucosidase activity
- carbohydrate binding
- catalytic activity
|
- metabolic process
- polysaccharide metabolic process
- carbohydrate metabolic process
|
| 2erkA |
[pdb] |
1.91513 0.00281947 | 129TYR 136LYS 139HIS 147ASP 152ASN 165ASP |
2.7.11.24
|
- nucleoplasm
- protein complex
- perikaryon
- axon part
- dendrite cytoplasm
- cytosol
- nucleus
- insoluble fraction
- soluble fraction
|
- sensory perception of pain
- cell cycle
- positive regulation of transcription
- positive regulation of translation
- response to estrogen stimulus
- response to chemical stimulus
- positive regulation of cell migration
- positive regulation of cell proliferation
- protein kinase cascade
- intracellular signaling cascade
- signal transduction
- protein amino acid phosphorylation
- nuclear translocation of MAPK
- MAPKKK cascade
|
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- MAP kinase activity
- mitogen-activated protein kinase kinase kinase binding
- protein binding
- protein kinase activity
|
| 2r7oA |
[pdb] |
1.92228 0.0029112 | 242LYS 326TYR 457ARG 520ASP 631ASP 633ASN |
2.7.7.48
|
- RNA-directed RNA polymerase activity
- RNA binding
- nucleotide binding
- magnesium ion binding
- transferase activity
- nucleotidyltransferase activity
|
- viral genome replication
- transcription
- transcription
- RNA-dependent
|
- virion
- viral nucleocapsid
|
| 2v62B |
[pdb] |
1.92613 0.00300413 | 22ASP 23ASP 27ASN 44TYR 61LYS 117ARG |
2.7.11.1
|
- membrane
- integral to membrane
- membrane fraction
- endoplasmic reticulum
|
- protein amino acid phosphorylation
- protein amino acid autophosphorylation
|
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- protein kinase activity
- protein binding
|
| 1ftaC |
[pdb] |
1.93161 0.0030988 | 209TYR 218ASP 220ASP 229ARG 230LYS 267ASN |
3.1.3.11
|
- gluconeogenesis
- carbohydrate metabolic process
- fructose metabolic process
|
- hydrolase activity
- zinc ion binding
- catalytic activity
- fructose 1,6-bisphosphate 1-phosphatase activity
- fructose-2,6-bisphosphate 2-phosphatase activity
- phosphoric ester hydrolase activity
- identical protein binding
- protein binding
- magnesium ion binding
- metal ion binding
|
|
| 2i6lB |
[pdb] |
1.93598 0.00309923 | 134TYR 141LYS 144HIS 152ASP 157ASN 171ASP |
2.7.11.24
|
- cell cycle
- signal transduction
- protein amino acid phosphorylation
|
|
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- MAP kinase activity
- protein kinase activity
- protein binding
|
| 1eq2C |
[pdb] |
1.93636 0.00309927 | 31ASP 32ASN 52ASP 74HIS 94TYR 98LYS |
5.1.3.20
|
- isomerase activity
- ADP-glyceromanno-heptose 6-epimerase activity
- coenzyme binding
- NADP or NADPH binding
- binding
- catalytic activity
- protein binding
|
- lipopolysaccharide biosynthetic process
- response to stress
- carbohydrate metabolic process
- cellular metabolic process
- metabolic process
|
- membrane
- cytosol
- mitochondrion
|
| 1nw1B |
[pdb] |
1.9409 0.00319707 | 179LYS 181HIS 255ASP 313ASP 316ASN 353TYR |
0.0.0.0
|
|
|
|
| 1n8vB |
[pdb] |
1.94368 0.00319735 | 6ASP 9ASP 10ASN 26TYR 44LYS 46HIS |
0.0.0.0
|
|
|
|
| 1gq2I |
[pdb] |
1.95752 0.0034037 | 31ASP 90ASP 92ASN 194LYS 196HIS 558TYR |
1.1.1.40
|
|
- metal ion binding
- oxidoreductase activity
- malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity
- NAD or NADH binding
- oxidoreductase activity
- acting on the CH-OH group of donors
- NAD or NADP as acceptor
- binding
- malic enzyme activity
- catalytic activity
|
- oxidation reduction
- metabolic process
- malate metabolic process
|
| 2duoB |
[pdb] |
1.95942 0.00340391 | 87TYR 119LYS 207ARG 229ASP 232ASP 234ASN |
|
- Golgi membrane
- integral to membrane
- membrane
- Golgi apparatus
|
- protein transport
- transport
|
- sugar binding
- calcium ion binding
|
| 2r91A |
[pdb] |
1.96187 0.00351206 | 128ARG 132LYS 133TYR 149ASN 157ASP 159ASP |
0.0.0.0
|
|
- lyase activity
- catalytic activity
|
|
| 2no4B |
[pdb] |
1.96243 0.00351213 | 11ASP 58TYR 149LYS 156ARG 178ASN 181ASP |
3.8.1.2
|
|
- hydrolase activity
- (S)-2-haloacid dehalogenase activity
- hydrolase activity
- acting on acid halide bonds
- in C-halide compounds
- phosphoglycolate phosphatase activity
- catalytic activity
|
|
| 2w1gA |
[pdb] |
1.97217 0.003625 | 246TYR 250LYS 256ASP 261ASN 274ASP 280HIS |
2.7.11.1
|
- protein binding
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- protein kinase activity
- ubiquitin protein ligase binding
|
- regulation of protein stability
- cell cycle
- spindle organization
- phosphoinositide-mediated signaling
- mitosis
- protein amino acid phosphorylation
- mitotic cell cycle
|
- spindle
- centrosome
- nucleus
|
| 2zs1B |
[pdb] |
1.98399 0.0038624 | 11VAL 12ILE 18VAL 125ALA 126HIS 127ILE |
|
- extracellular region
- hemoglobin complex
- extracellular region
- hemoglobin complex
- extracellular region
- hemoglobin complex
- extracellular region
- hemoglobin complex
|
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
|
- oxygen transport
- transport
- oxygen transport
- transport
- oxygen transport
- transport
- oxygen transport
- transport
|
| 2fgtA |
[pdb] |
1.987 0.00386278 | 71HIS 80ASP 81ASP 82ASN 125LYS 172TYR |
|
|
- metal ion binding
- calcium ion binding
|
- plasma membrane
- integral to membrane
- membrane
|
| 3coiA |
[pdb] |
1.99428 0.00398837 | 132TYR 136LYS 142HIS 150ASP 155ASN 168ASP |
2.7.11.24
|
|
- MP kinase activity
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- MAP kinase activity
- protein binding
- protein kinase activity
|
- protein kinase cascade
- response to stress
- cell cycle
- Ras protein signal transduction
- intracellular signaling cascade
- protein amino acid phosphorylation
|
| 1ffyA |
[pdb] |
1.99832 0.00398888 | 680TYR 797LYS 799ARG 806ASP 807ASP 809ASN |
6.1.1.5
|
|
- metal ion binding
- ligase activity
- zinc ion binding
- ATP binding
- aminoacyl-tRNA ligase activity
- nucleotide binding
- isoleucine-tRNA ligase activity
- catalytic activity
|
- translation
- isoleucyl-tRNA aminoacylation
- tRNA aminoacylation for protein translation
|
| 2zr2B |
[pdb] |
1.99825 0.00398887 | 119ASP 122ASP 123ASN 141ARG 338TYR 367LYS |
6.1.1.11
|
|
- ligase activity
- ATP binding
- aminoacyl-tRNA ligase activity
- nucleotide binding
- serine-tRNA ligase activity
|
- translation
- seryl-tRNA aminoacylation
- tRNA aminoacylation for protein translation
- selenocysteine biosynthetic process
|
| 1ixkA |
[pdb] |
2.0043 0.00411667 | 244TYR 263ASP 264ASN 266ASP 311LYS 313ARG |
0.0.0.0
|
|
- S-adenosylmethionine-dependent methyltransferase activity
- RNA binding
- methyltransferase activity
|
|
| 2v05A |
[pdb] |
2.00529 0.0041168 | 9ASP 11ASP 12ASN 21HIS 22LYS 25TYR |
0.0.0.0
|
|
|
|
| 2d40B |
[pdb] |
2.00739 0.00424656 | 47TYR 132ASN 135ASP 218ASP 281HIS 301LYS |
0.0.0.0
|
|
|
- oxidoreductase activity
- acting on single donors with incorporation of molecular oxygen
- incorporation of two atoms of oxygen
|
| 1n44A |
[pdb] |
2.0101 0.00424693 | 48ARG 62ASP 65ASN 66ASP 84LYS 89TYR |
0.0.0.0
|
|
- blood coagulation
- negative regulation of coagulation
- response to organic substance
- protein homooligomerization
|
- calcium-dependent phospholipid binding
- calcium ion binding
- protein binding
- receptor tyrosine kinase binding
- eukaryotic cell surface binding
|
| 1wk1A |
[pdb] |
2.01029 0.00424695 | 33TYR 40ASP 41ASP 43ASN 129LYS 131ARG |
0.0.0.0
|
|
|
|
| 3gfoA |
[pdb] |
2.01543 0.00438218 | 90ASP 92ASP 93ASN 101TYR 137LYS 140HIS |
0.0.0.0
|
- cobalt ion binding
- hydrolase activity
- cobalt ion transmembrane transporter activity
- ATP binding
- nucleotide binding
- nucleoside-triphosphatase activity
- ATPase activity
|
- cobalt ion transport
- ion transport
- transport
|
- plasma membrane
- membrane
- Gram-negative-bacterium-type cell wall
|
| 1jc9A |
[pdb] |
2.01607 0.00438227 | 94ARG 98TYR 121LYS 147ASP 150ASN 151ASP |
|
- cell-cell adhesion
- signal transduction
|
|
- sugar binding
- calcium ion binding
- receptor binding
- metal ion binding
|
| 2eixB |
[pdb] |
2.01951 0.00438276 | 65ARG 118LYS 120TYR 194ASN 196ASP 197ASP |
0.0.0.0
|
|
|
- oxidoreductase activity
- electron carrier activity
|
| 11asB |
[pdb] |
2.02147 0.00452288 | 77LYS 78ARG 93TYR 219ASP 220ASP 233ASN |
6.3.1.1
|
- cellular amino acid biosynthetic process
- asparagine biosynthetic process
- tRNA aminoacylation for protein translation
- translation
|
|
- ligase activity
- aspartate-ammonia ligase activity
- ATP binding
- aminoacyl-tRNA ligase activity
- nucleotide binding
- protein binding
|
| 2f49A |
[pdb] |
2.03429 0.00467026 | 119TYR 126LYS 129HIS 137ASP 142ASN 155ASP |
2.7.11.24
|
- cell division
- mitosis
- cell cycle
- conjugation
- negative regulation of MAPKKK cascade
- cell cycle arrest
- protein amino acid phosphorylation
- invasive growth in response to glucose limitation
- pheromone-dependent signal transduction involved in conjugation with cellular fusion
|
- periplasmic space
- cytoplasm
- nucleus
- mating projection tip
- mitochondrion
|
- transferase activity
- kinase activity
- ATP binding
- protein serine/threonine kinase activity
- nucleotide binding
- MAP kinase activity
- protein kinase activity
- protein binding
|
| 1dnkA |
[pdb] |
2.03625 0.00482195 | 76TYR 77LYS 79ARG 168ASP 170ASN 212ASP |
3.1.21.1
|
- apoptosis
- DNA catabolic process
|
- hydrolase activity
- calcium ion binding
- endonuclease activity
- nuclease activity
- actin binding
- deoxyribonuclease I activity
- deoxyribonuclease activity
|
- nuclear envelope
- extracellular region
- nucleus
|
| 2iukA |
[pdb] |
2.04172 0.00482282 | 445ARG 453LYS 455TYR 482ASP 484ASP 485ASN |
1.13.11.12
|
|
- metal ion binding
- oxidoreductase activity
- acting on single donors with incorporation of molecular oxygen
- incorporation of two atoms of oxygen
- oxidoreductase activity
- iron ion binding
- lipoxygenase activity
- electron carrier activity
|
- oxidation reduction
- oxylipin biosynthetic process
- lipid biosynthetic process
- fatty acid biosynthetic process
|
| 3cf4A |
[pdb] |
2.04652 0.00498121 | 55VAL 56LYS 58SER 678TYR 801LYS 802ARG |
1.2.99.2
|
|
- iron ion binding
- metal ion binding
- catalytic activity
- oxidoreductase activity
- carbon-monoxide dehydrogenase (acceptor) activity
- 4 iron
- 4 sulfur cluster binding
- iron-sulfur cluster binding
- nickel ion binding
- electron carrier activity
- catalytic activity
|
- metabolic process
- oxidation reduction
- generation of precursor metabolites and energy
- acetyl-CoA metabolic process
|
| 2gfiB |
[pdb] |
2.04726 0.00498133 | 382LYS 383TYR 392ARG 416ASN 417ASP 420ASP |
0.0.0.0
|
|
|
- hydrolase activity
- 3-phytase activity
- acid phosphatase activity
|
| 2qt3B |
[pdb] |
2.04817 0.00498148 | 11ASN 22ASP 29ARG 46ASP 357TYR 364LYS |
3.5.99.4
|
|
|
- hydrolase activity
- N-isopropylammelide isopropylaminohydrolase activity
- hydrolase activity
- acting on carbon-nitrogen (but not peptide) bonds
|
| 1khoA |
[pdb] |
2.04996 0.00498178 | 293ASP 297ASN 298ASP 327ARG 330LYS 331TYR |
3.1.4.3
|
|
- hemolysis by symbiont of host erythrocytes
- cytolysis
- pathogenesis
|
- metal ion binding
- hydrolase activity
- zinc ion binding
- calcium ion binding
- phosphatidylcholine phospholipase C activity
- hydrolase activity
- acting on ester bonds
- phospholipase C activity
|
| 2fuvB |
[pdb] |
2.05151 0.00514618 | 476ASP 481ARG 496LYS 500ASP 501ASN 518TYR |
0.0.0.0
|
|
- carbohydrate metabolic process
|
- metal ion binding
- isomerase activity
- magnesium ion binding
- phosphoglucomutase activity
- intramolecular transferase activity
- phosphotransferases
|
| 2eaeA |
[pdb] |
2.05296 0.00514643 | 16ASP 17ASP 160ASN 357TYR 367LYS 368ARG |
0.0.0.0
|
|
|
|
| 3bkbA |
[pdb] |
2.05997 0.00531864 | 673TYR 677LYS 683ASP 688ASN 701ASP 706ARG |
2.7.10.2
|
- multicellular organismal development
- cell proliferation
- protein amino acid phosphorylation
- peptidyl-tyrosine phosphorylation
|
|
- protein binding
- transferase activity
- kinase activity
- ATP binding
- protein tyrosine kinase activity
- nucleotide binding
- non-membrane spanning protein tyrosine kinase activity
- protein kinase activity
|
| 2esmB |
[pdb] |
2.07057 0.00549505 | 84ARG 105LYS 150TYR 160ASP 202ASP 203ASN |
2.7.11.1
|
- cytosol
- intracellular
- cytoplasm
- Golgi membrane
- membrane
- Golgi apparatus
- centriole
|
- identical protein binding
- nucleotide binding
- protein serine/threonine kinase activity
- protein kinase activity
- ATP binding
- protein binding
- metal ion binding
- diacylglycerol binding
- transferase activity
- kinase activity
- zinc ion binding
|
- leukocyte migration
- Rho protein signal transduction
- signal transduction
- actin cytoskeleton organization
- protein amino acid phosphorylation
- intracellular signaling cascade
- cytokinesis
- negative regulation of neuron apoptosis
- bleb formation
- membrane to membrane docking
- leukocyte adhesion
- leukocyte tethering or rolling
- apoptosis
|
| 2c7hA |
[pdb] |
2.07116 0.00549515 | 11TYR 12LYS 64ASP 65ASP 66ASN 78ARG |
|
- metal ion binding
- zinc ion binding
- protein binding
- ubiquitin-protein ligase activity
- nucleic acid binding
|
- nucleus
- ubiquitin ligase complex
- nucleolus
|
|
| 1v4xD |
[pdb] |
2.07514 0.0056741 | 685TYR 699ASP 701ASP 702ASN 744LYS 746HIS |
0.0.0.0
|
- hemoglobin complex
- hemoglobin complex
|
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
|
- oxygen transport
- transport
- oxygen transport
- transport
|
| 1spgB |
[pdb] |
2.07959 0.00567493 | 85TYR 86LYS 99ASP 101ASP 102ASN 144ARG |
|
- hemoglobin complex
- hemoglobin complex
|
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
- metal ion binding
- iron ion binding
- oxygen transporter activity
- heme binding
- oxygen binding
|
- oxygen transport
- transport
- oxygen transport
- transport
|
| 1e09A |
[pdb] |
2.08167 0.00586104 | 25ASP 27ASP 28ASN 66TYR 68LYS 69HIS |
|
|
|
- response to biotic stimulus
- defense response
|
| 2fvmC |
[pdb] |
2.08194 0.00586109 | 318ASN 320ASP 321ASP 362TYR 373LYS 374HIS |
3.5.2.2
|
|
|
- metal ion binding
- hydrolase activity
- zinc ion binding
- dihydropyrimidinase activity
- hydrolase activity
- acting on carbon-nitrogen (but not peptide) bonds
|
| 2p3yA |
[pdb] |
2.08875 0.00605593 | 369ASP 371ASP 373ASN 382LYS 384HIS 435TYR |
0.0.0.0
|
|
|
|
| 2r0tB |
[pdb] |
2.08882 0.00605595 | 92TYR 103LYS 108ASP 113ASN 115ASP 353HIS |
0.0.0.0
|
|
|
- pyridoxal phosphate binding
- catalytic activity
|
| 3b95A |
[pdb] |
2.08988 0.00605616 | 813HIS 817LYS 839ASP 840ASP 852TYR 873ASN |
2.1.1.43
|
- histone methylation
- chromatin modification
|
- histone-lysine N-methyltransferase activity
- methyltransferase activity
- metal ion binding
- transferase activity
- zinc ion binding
|
|
| 3cs0A |
[pdb] |
2.09051 0.00605629 | 104ASN 131ASP 135ASP 257TYR 261LYS 262ARG |
|
- hydrolase activity
- serine-type peptidase activity
- peptidase activity
- protein binding
- serine-type endopeptidase activity
- catalytic activity
|
|
- response to stress
- proteolysis
|